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Job DescriptionP00509
Confidence99.92%DateThu Jan 5 10:56:40 GMT 2012
Rank129Aligned Residues335
% Identity17%Templatec2zsmA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  INLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALR
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Template Sequence  VDLVLAYGPLILGHKH. . PRVLEAVEEALARGWLY. GAPGEAEVLLAEKILGYV. . . . . . . . . KRGGMIRFVNSGTEATM
Template Known Secondary structure  SSGGGTT
TT
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..TT
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   5960.........70.... .....80.........90. ........100......... 110.........120......
 
   109110.........120.........130.........140..... ....150.........160.........170......
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Query Sequence  VAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVR. . . . . . . . . . . . EYAYYDAENHTLDFDALINSLNEAQAGDVVL
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Template Sequence  TAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGGVPTSAGVPEAVARLTLVTPYN. . . . . DVEALERVFAEYGDRIAGV
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T



SSGGGS


SSTT

TTTT.....
GGG
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   127..130.........140.........150.........160.........170.........180.. .......190.........200.
 
   177..180 .........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  FHGC. CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV
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Template Sequence  IVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG. . . . LEGAQGYFNIEGDII. . . VLGKIIG. GGFPV
Template Known Secondary structure 
SSB
SSS
B


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TTTTTTSS....TTT


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   208.210.........220.........230.........240.........250.. .......260....... ..270.... .....
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  GACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN
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Template Sequence  GAVAGSREVMSLLTPQ. . . . GKVFNAGTFNAHPITMAAGLATLK. . . . ALEEEPVYSVSREAAKALEEAASEVLDRTGLP
Template Known Secondary structure 
TTBTTT....SSB



TTTT
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   280.........290..... ....300.........310......... 320.........330.........340.........350.
 
   336...340.........350..... ....360.........370... ..... .380.........390......
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Query Sequence  RDFSFIIKQNGMFSFSGLTK. . . . . . . . . . . . . EQVLRLREEFGVYAVASG. . RVNVA. GMTPDNMAPLCEAIVAVL
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Template Sequence  YTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNLEAVFTGLPHQGEALEIAVEGLRSSL
Template Known Secondary structure  TTT
S

SSTTS
TT

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TT
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   352.......360.........370.........380.........390.........400.........410.........420........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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