Job Description P00509 Confidence 99.92% Date Thu Jan 5 10:56:40 GMT 2012 Rank 135 Aligned Residues 325 % Identity 16% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.													.	.	.	.											.	.																											.	.
Template Conservation									.	.	.	.	.	.	.													.	.	.	.											.	.																											.	.
Template Sequence		M	L	L	L	T	P	G	.	.	.	.	.	.	.	P	T	P	I	P	E	R	V	Q	K	A	L	.	.	.	.	L	R	P	M	R	G	H	L	D	P	.	.	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	.	.	A	L	A	G	S	G	S	L	G	M
Template Known Secondary structure						S	S	S	.	.	.	.	.	.	.	S									G	G	G	.	.	.	.	G	S					T	T			.	.																					T	T					.	.			S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.													.	.	.	.											.	.																											.	.
Template SS confidence
		1	.	.	.	.	.	.								.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	.	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G
Query Conservation																									.
Alig confidence						.	.	.																	.																				.	.																						.	.
Template Conservation						.	.	.																																					.	.																						.	.
Template Sequence		E	A	G	L	.	.	.	A	N	L	D	R	G	P	V	L	V	L	V	N	G	A	F	S	Q	R	V	A	E	M	A	A	L	H	G	L	D	P	E	V	L	D	F	.	.	P	P	G	E	P	V	D	P	E	A	V	A	R	A	L	K	R	R	R	Y	R	.	.	M	V	A	L	V	H	G	E	T	S	T	G
Template Known Secondary structure						.	.	.		T		S										S													T	T									.	.		T	T	S														S			S	.	.						S			T	T	T	T
Template Predicted Secondary structure						.	.	.																																					.	.																						.	.
Template SS confidence
		66	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E
Query Conservation
Alig confidence						.	.	.																												.	.	.	.	.	.	.	.	.																					.
Template Conservation						.	.	.																												.	.	.	.	.	.	.	.	.																					.
Template Sequence		V	L	N	P	.	.	.	A	E	A	I	G	A	L	A	K	E	A	G	A	L	F	F	L	D	A	V	T	T	L	G	M	L	P	.	.	.	.	.	.	.	.	.	F	S	M	R	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	.	A	P	P	G	L	A	P	I	A	A	S	L	E	A	R	K
Template Known Secondary structure						.	.	.												T								T	T	T	T	T	T	S		.	.	.	.	.	.	.	.	.							T		S						T	T	S	T	T		.			S	S
Template Predicted Secondary structure						.	.	.																												.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		139	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		267	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	.	.	.	.	.	.	.	.	.	.	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.																												.	.
Template Conservation																																													.	.	.	.	.	.	.																												.	.
Template Sequence		A	F	T	G	K	R	G	W	Y	L	D	L	A	R	V	A	E	H	W	E	R	G	G	Y	H	H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	.	.	.	.	.	.	.	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	.	.	F
Template Known Secondary structure							S		S	T	T										T	T				S	S																		.	.	.	.	.	.	.																										T	T	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.																												.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.								.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.									.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																							.	.	.	.	.	.	.	.					.	.
Query SS confidence																	.	.	.	.																							.	.	.	.	.	.	.	.					.	.
Query Sequence		D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	R	V	N	V	.	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																	.	.	.	.																							.	.	.	.	.	.	.	.					.	.
Alig confidence																	.	.	.	.																							.	.	.	.	.	.	.	.					.	.
Template Conservation
Template Sequence		R	P	Y	P	K	A	S	P	L	P	T	V	L	V	V	R	P	P	E	G	V	D	A	D	R	L	V	R	A	L	Y	A	E	G	V	A	V	A	G	G	I	G	P	T	R	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L
Template Known Secondary structure				S		S	S	S	B		T	T								T	T													T	T								G	G	G	T	T	T							S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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