Job Description P00509 Confidence 99.84% Date Thu Jan 5 10:56:40 GMT 2012 Rank 191 Aligned Residues 331 % Identity 15% Template c2pb2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding Resolution 1.91 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.															.	.	.																									.	.	.	.					.	.
Template Conservation																			.	.															.	.	.																									.	.	.	.					.	.
Template Sequence		Y	I	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	.	.	P	A	L	V	E	A	L	K	S	Q	G	E	T	L	.	.	.	W	H	T	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	D	A	T	F	.	.	.	.	A	E	R	V	.	.	L	F	M	N	S	G	T	E	A	N
Template Known Secondary structure					S	S					T		T	T		B	S		.	.												T	T		.	.	.					T	T	S																S	S	.	.	.	.		S			.	.				S	S
Template Predicted Secondary structure																			.	.															.	.	.																									.	.	.	.					.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.			.	.	.	.	.	.	.	110	.	.
		108	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																				.																						.	.
Query SS confidence									.	.	.	.	.	.																				.																						.	.
Query Sequence		R	V	A	A	D	F	L	.	.	.	.	.	.	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	.	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	.	.	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H
Query Conservation									.	.	.	.	.	.																				.																						.	.
Alig confidence									.	.	.	.	.	.																				.																						.	.
Template Conservation
Template Sequence		E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V
Template Known Secondary structure																T		T	T								T	T					S	S							S	S						T	T	S	S	S			S							T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		179	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	C	C	H	N	P	T	G	.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A
Query Conservation										.
Alig confidence										.																																					.	.	.															.	.	.								.
Template Conservation																																															.	.	.															.	.	.								.
Template Sequence		E	P	I	Q	G	E	G	G	V	Q	A	A	T	P	E	F	L	K	G	L	R	D	L	C	D	E	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	.	.	.	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	.	.	.	T	S	A	K	A	L	G	.	G	G	F	P	V	S	A
Template Known Secondary structure			S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S						T				S			.	.	.				G	G	G	T	.	T	T	S
Template Predicted Secondary structure																																															.	.	.															.	.	.								.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.		.	260	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																												.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																												.	.	.
Template Sequence		M	L	T	T	.	.	.	.	.	.	.	.	.	.	.	Q	E	I	A	S	A	F	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	.	.	.	.	.	.	P	E	V	L	Q	G	I	H	T	K	R	Q	Q	F	V	Q	H	L	Q	A	I	D	E	Q	F	D	I	.	.	.
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.					T	T																						S	S	.	.	.	.	.	.																												.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																												.	.	.
Template SS confidence
		266	.	.	.												270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																							.	.	.	.					.
Query SS confidence																.	.	.	.	.																							.	.	.	.					.
Query Sequence		F	S	F	I	I	K	Q	N	G	M	F	S	F	S	.	.	.	.	.	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																.	.	.	.	.																							.	.	.	.					.
Alig confidence																.	.	.	.	.																							.	.	.	.					.
Template Conservation
Template Sequence		F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	K	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	A	D	V	M	R	F	A	P	S	L	V	V	E	E	A	D	I	H	E	G	M	Q	R	F	A	Q	A	V
Template Known Secondary structure									T	T								G	G	G	T	T												T	T						S	S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions