Phyre 2 alignment of P00509 with c2ordA

Job Description P00509
Confidence 99.93% Date Thu Jan 5 10:56:40 GMT 2012

Rank 120 Aligned Residues 339

% Identity 13% Template c2ordA_

PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

Resolution 1.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																		.	.															.	.	.																											.	.	.	.	.	.
Template Conservation																		.	.															.	.	.																											.	.	.	.	.	.
Template Sequence	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	.	.	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	.	.	.	I	H	C	S	N	L	F	W	N	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	G	.	.	.	.	.	.	K	V	F	F	A	N	T	G	T	E	A	N
Template Known Secondary structure				S	S					T		T	T		B	T		.	.															.	.	.	S				T	T	S															T	T	T	S		.	.	.	.	.	.						S	S
Template Predicted Secondary structure																		.	.															.	.	.																											.	.	.	.	.	.
Template SS confidence
	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.

	108	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																				.																							.	.
Query SS confidence								.	.	.	.	.																				.																							.	.
Query Sequence	R	V	A	A	D	F	L	.	.	.	.	.	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	.	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	.	.	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G
Query Conservation								.	.	.	.	.																				.																							.	.
Alig confidence								.	.	.	.	.																				.																							.	.
Template Conservation
Template Sequence	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C	A	V	F	L	E
Template Known Secondary structure																T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
	99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence	C	C	H	N	P	T	G	.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C
Query Conservation								.
Alig confidence								.																																					.	.	.															.	.	.								.
Template Conservation																																													.	.	.															.	.	.								.
Template Sequence	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	.	.	.	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	.	.	.	T	T	A	K	G	L	G	.	G	G	V	P	I	G	A	V
Template Known Secondary structure	S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S						T				S			.	.	.				G	G	G	G	.	T	T	S
Template Predicted Secondary structure																																													.	.	.															.	.	.								.
Template SS confidence
	179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.		.	.	.	.	.	.	250	.

	259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence	I	V	N	E	R	A	N	V	L	.	.	.	.	.	.	.	.	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	.	.	.	.	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K	E	E	Y	D	V	V	A	D	V
Template Known Secondary structure				S	T	T				.	.	.	.	.	.	.	.		T	T	S	S			S	S	T	T														.	.	.	.			T	S	T	T																								T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
	252	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

	339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.						.
Query SS confidence																																				.	.	.	.						.
Query Sequence	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	R	V	N	V	A	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation																																				.	.	.	.						.
Alig confidence																																				.	.	.	.						.
Template Conservation
Template Sequence	R	G	X	G	L	X	I	G	I	Q	F	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	G	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T	L	K	K	V	L
Template Known Secondary structure				T	T								T	T	S												T	T							T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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