Job Description P00509 Confidence 99.78% Date Thu Jan 5 10:56:40 GMT 2012 Rank 212 Aligned Residues 269 % Identity 13% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	.	.	.	.	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y
Query Conservation																																																															.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.													.	.	.																							.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		N	C	L	E	K	A	V	A	A	L	D	G	A	K	.	.	.	.	.	.	.	.	.	.	Y	C	L	A	F	A	S	G	L	A	A	T	.	.	.	V	T	I	T	H	L	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V
Template Known Secondary structure												T	T		S	.	.	.	.	.	.	.	.	.	.						S	S						.	.	.					T	T	S		T	T							S	S												T	G	G	G	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	.	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E
Query Conservation																																																												.
Alig confidence					.	.	.	.	.	.	.										.	.	.																						.	.	.													.											.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.										.	.	.																						.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		D	C	S	.	.	.	.	.	.	.	K	I	K	L	L	E	A	A	I	.	.	.	T	P	E	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	.	.	.	I	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	M	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure				S	.	.	.	.	.	.	.	S									.	.	.		T	T								S	S		T	T	T						.	.	.									T	T	S	S	S								T	T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.										.	.	.																						.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.								.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.											.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	.	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A
Query Conservation																									.
Alig confidence																									.															.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		P	Y	F	Q	R	P	L	A	L	G	A	D	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	.	.	.	.	.	.	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	P	S	P	I	D	C	Y	L	C	N	R	G	L	K	T	.	.	.	.	.
Template Known Secondary structure							T	T	T	T	T		S						T	T	T	T	T	T		S	S	S												.	.	.	.	.	.																														T	T	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.																				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	.	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E	S	N	P	W	.	.	.	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	H	A	E	I	F	L	K	N	L	K
Template Known Secondary structure		.	.	.	.	.																					T		T	T	.	.	.							T	T	S	T	T	S	T	T									S	S			S							S	S													S
Template Predicted Secondary structure		.	.	.	.	.																									.	.	.
Template SS confidence
							262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
			365	.	.	.	.	370	.	.	.																																.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		.	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	A	G	M	T	P	D	N	.	M	A	P	L	C	E	A	I	V	A	V
Query Conservation		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A	A
Template Known Secondary structure		S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions