Job Description P00509 Confidence 99.89% Date Thu Jan 5 10:56:40 GMT 2012 Rank 160 Aligned Residues 338 % Identity 15% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	.	.	P	K	V	L	A	R	V	R	E	T	L	E	R	G	L	T	F	.	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	.	.	.	.	.	.	.	.	.	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T
Template Known Secondary structure					S	S	G	G	G	T	T		T	T		B	T		.	.													T		S			.	S	S																	.	.	.	.	.	.	.	.	.	T	T								S	S
Template Predicted Secondary structure																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	.	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	.	.	.	.	.	.	.	.	.	.	.	.	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V
Query Conservation																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	A	L	R	L	A	R	G	Y	T	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	E	I	A
Template Known Secondary structure																					T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T						T	T													G	G	G
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R
Query Conservation
Alig confidence																																																.	.	.	.																.	.	.								.
Template Conservation																																																.	.	.	.																.	.	.								.
Template Sequence		A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	R	L	A	.	.	.	.	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	.	.	.	T	L	G	K	I	L	G	.	G	G	L	P
Template Known Secondary structure							S	S	B		T	T	S		B													G	G	G	G	T								T	T	T	T	T	T	S	S	.	.	.	.	T	T							T				S			.	.	.				G	G	G	G	.	T	T	S	S
Template Predicted Secondary structure																																																.	.	.	.																.	.	.								.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.		270	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A
Query Conservation
Alig confidence																			.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L	.	.	.	.	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	.	.	.	.	.	.	.	L	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K
Template Known Secondary structure													T	T	B	T	T	T	.	.	.	.	S	S	B					T	T		S														.	.	.	.	.	.	.						T
Template Predicted Secondary structure																			.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.								.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.					.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.					.
Query Sequence		N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	S	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.					.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.					.
Template Conservation
Template Sequence		E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	G	I	Y	W	P	P	S	N	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K
Template Known Secondary structure			T	T									T	T						S	S	S	S				S					T	T	S														T	T	T					S	S	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		395	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		423	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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