Job Description P00509 Confidence 99.87% Date Thu Jan 5 10:56:40 GMT 2012 Rank 172 Aligned Residues 314 % Identity 16% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	D	F	F	G	G	H	G	A	L	V	L	G	H	G	H	.	.	P	R	V	N	A	A	I	A	E	A	L	S	H	G	V	Q	Y	.	A	A	S	H	P	L	E	V	R	W	A	E	R	I	V	A	A	F	.	.	.	.	.	.	.	.	.	P	S	I	R	K	L	R	F	T	G	S	G	T	E	T	T
Template Known Secondary structure					S		T	T	T	T	S		T	T		B	T		.	.												T	T	T		S	S	.		S	S																.	.	.	.	.	.	.	.	.	T	T		S						S
Template Predicted Secondary structure																			.	.																		.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		L	L	A	L	R	V	A	R	A	F	T	G	R	R	M	I	L	R	F	E	G	T	T	A	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	I	R	P	D	.	.	.	.	.	D	I	E	G	M	R	E	V	F	A	N	H	G	S	D	I	A	A	F	I	A	E	P	V	G	S	H	F	G	V
Template Known Secondary structure																								G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	.	.	.	.	.													G	G	G								S	S						T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.														.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		188		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		D	.	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E
Query Conservation			.
Alig confidence			.																																	.	.	.	.																.	.	.								.												.	.	.	.	.
Template Conservation																																				.	.	.	.																.	.	.								.												.	.	.	.	.
Template Sequence		T	P	V	S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	A	L	F	I	L	D	E	V	I	S	G	F	R	V	G	.	.	.	.	N	H	G	M	Q	A	L	L	D	V	Q	P	D	L	T	.	.	.	C	L	A	K	A	S	A	.	G	G	L	P	G	G	I	L	G	G	R	.	.	.	.	.
Template Known Secondary structure																			T	T								T	T	T	T	T	T	T		.	.	.	.	T	T							T				S			.	.	.				G	G	G	G	.	T	T	S	S								.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																.	.	.								.												.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G
Query Conservation
Alig confidence		.	.	.	.	.	.																												.	.	.	.																																	.	.
Template Conservation		.	.	.	.	.	.																												.	.	.	.																																	.	.
Template Sequence		.	.	.	.	.	.	E	D	V	M	G	V	L	S	R	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	.	.	.	.	T	I	L	E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R	K	G	L	N	.	.	W	L	A	Y	G	R	F	S	G
Template Known Secondary structure		.	.	.	.	.	.					T	T	S	S	S																			.	.	.	.					T	T																							T	T			.	.							T	T
Template Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.																																	.	.
Template SS confidence
								284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.
		347	.	.	350	.	.	.	.																						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		M	F	S	F	S	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	R	V	N	V	.	A	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		F	H	L	M	P	G	L	P	P	N	T	T	D	T	G	S	I	T	R	A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	G	G	R	G	S	V	F	L	S	A	Q	H	E	R	E	H	V	E	H	L	V	T	T	F	D	R	V	L
Template Known Secondary structure							T	S		T	T									T	T		S																		T	T				B	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions