Job Description P00509 Confidence 99.86% Date Thu Jan 5 10:56:40 GMT 2012 Rank 179 Aligned Residues 318 % Identity 14% Template c1z7dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii Resolution 2.10 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L
Query Conservation
Alig confidence																			.	.															.	.	.																											.	.	.	.	.	.
Template Conservation																			.	.															.	.	.																											.	.	.	.	.	.
Template Sequence		Y	Y	D	F	L	S	A	Y	S	S	V	N	Q	G	H	C	H	.	.	P	N	I	L	N	A	M	I	N	Q	A	K	N	L	.	.	.	T	I	C	S	R	A	F	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	.	.	.	.	.	.	K	V	L	M	M	N	T	G	A	E	A	N
Template Known Secondary structure					S	S					T	T	T	T		B	T		.	.												T	T		.	.	.	S				T	T	S																	T		S	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																			.	.															.	.	.																											.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	.
Query Conservation																																																																																	.
Alig confidence									.	.																		.	.	.	.	.	.	.											.	.	.	.	.	.	.										.	.	.																		.
Template Conservation									.	.																		.	.	.	.	.	.	.											.	.	.	.	.	.	.										.	.	.
Template Sequence		E	T	A	Y	K	L	C	.	.	R	K	W	G	Y	E	V	K	K	I	P	E	N	M	A	K	I	.	.	.	.	.	.	.	V	V	C	F	S	K	V	P	Y	D	.	.	.	.	.	.	.	D	L	E	A	L	E	E	E	L	.	.	.	K	D	P	N	V	C	A	F	I	V	E	P	I	Q	G	E	A	G
Template Known Secondary structure									.	.							T	S				T	T					.	.	.	.	.	.	.									T	T	.	.	.	.	.	.	.										.	.	.	T	S	T	T								S	S	B	S	T	T	T
Template Predicted Secondary structure									.	.																		.	.	.	.	.	.	.											.	.	.	.	.	.	.										.	.	.
Template SS confidence
		116	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
			187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S
Query Conservation		.
Alig confidence		.																																					.	.	.															.	.	.																					.	.	.
Template Conservation																																							.	.	.															.	.	.																					.	.	.
Template Sequence		V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E	V	Q	T	G	L	G	R	T	G	K	.	.	.	L	L	C	V	H	H	Y	N	V	K	P	D	V	I	.	.	.	L	L	G	K	A	L	S	G	G	H	Y	P	I	S	A	V	L	A	N	D	.	.	.
Template Known Secondary structure			B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	.	.	.	S	S	G	G	G	G	G	T				S			.	.	.				G	G	G	G	T	T	S	S										.	.	.
Template Predicted Secondary structure																																							.	.	.															.	.	.																					.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N
Query Conservation
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	I	M	L	V	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	.	.	.	.	.	.	.	.	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I	V	R	D	V	R	G	K
Template Known Secondary structure		.	.	.	.				T	T											T	T														.	.	.	.	.	.	.	.					T	T																				T	T	T		T	T
Template Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
						278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		346	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																					.	.	.	.						.
Query SS confidence										.	.	.	.	.																					.	.	.	.						.
Query Sequence		G	M	F	S	F	S	G	L	.	.	.	.	.	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	R	V	N	V	A	.	G	M	T	P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Query Conservation										.	.	.	.	.																					.	.	.	.						.
Alig confidence										.	.	.	.	.																					.	.	.	.						.
Template Conservation
Template Sequence		G	L	L	C	A	I	E	F	K	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	D	V	H	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I	I	V	K	T	V
Template Known Secondary structure		T	T								T	T	T													T	T							T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions