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Job DescriptionP00509
Confidence88.87%DateThu Jan 5 10:56:40 GMT 2012
Rank240Aligned Residues122
% Identity10%Templatec1qbaA_
PDB info PDB header:glycosyl hydrolaseChain: A: PDB Molecule:chitobiase; PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120. ........130. ........
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Query Sequence  GSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK. . . . . . . RVWVSNPSWP. . . . . . . . . . . . . . . . . . . NHKSVFNS
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Template Sequence  YELKIGKKEAQV. . IGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAA
Template Known Secondary structure 
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   289290.........300 .........310.........320.........330.........340.........350.........360......
 
   140.........150.........160...... ...170.........180.........190.........200.........
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Query Sequence  AGLEVREYAYYDAENHTLDFDALINSL. . . . . . . . NEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPL
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Template Sequence  YKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVI
Template Known Secondary structure  TT


B
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TT
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TT
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   367..370.........380.........390.........400.........410.........420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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