Job Description P00509 Confidence 84.74% Date Thu Jan 5 10:56:40 GMT 2012 Rank 243 Aligned Residues 110 % Identity 9% Template c1nouA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase beta chain; PDBTitle: native human lysosomal beta-hexosaminidase isoform b Resolution 2.40 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.																				.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	.	.	.	.	.	.	.	.	.	R	V	W	V	S	N	P	S	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	K	S	V	F
Query Conservation																																						.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																							.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		Y	T	L	L	V	K	E	P	V	A	V	L	.	.	K	A	N	R	V	W	G	A	L	R	G	L	E	T	F	S	Q	L	V	Y	Q	D	S	Y	G	T	F	T	I	N	E	S	T	I	I	D	S	P	R	F	S	H	R	G	I	L	I	D	T	S	R	H	Y	L	P	V	K	I	I	L	K	T	L	D	A	M
Template Known Secondary structure								S	S					.	.			S	S																			T	T															S		S								S	S	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	N	K	F	N	V	L	H	W	H	I	V	D	D	Q	S	F	P	Y	Q	S	I	T	F	P	E	L	S	N	K	G	S	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	L	S	H	V	Y	T	P	N	D	V	R	M	V	I	E	Y	A	R	L	R	G	I	R	V	L
Template Known Secondary structure				T	T											S	S				B			S	S		T							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		B															T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.													.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions