Job Description P00509 Confidence 99.88% Date Thu Jan 5 10:56:40 GMT 2012 Rank 168 Aligned Residues 302 % Identity 16% Template c1i41J_ PDB info PDB header:lyase Chain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa Resolution 3.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	.	.	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S
Query Conservation																															.	.
Alig confidence																															.	.																.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		S	A	Y	F	F	N	K	T	S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	T	V	V	L	E	E	K	I	S	A	L	E	G	A	E	.	.	.	.	.	.	.	.	.	.	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	.	.	V	P	A
Template Known Secondary structure		S	B				S										T	T	S	S					B	G	G	G																	T		S	.	.	.	.	.	.	.	.	.	.						S	S													.	.	S		T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	.	.	.	.	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A	Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.										.	.	.	.	.	.	.													.	.																					.	.	.
Template Conservation																																				.	.	.	.	.	.	.													.	.																					.	.	.
Template Sequence		G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	.	.	.	.	.	.	.	A	D	V	G	A	L	E	L	A	L	N	Q	.	.	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	.	.	.	I	E
Template Known Secondary structure		T							S	S												T	G	G	G	G	T								S	.	.	.	.	.	.	.	S												.	.	S									S	S		T	T	T						.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.													.	.																					.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	E	T	V	D	R	A	F	S	Q	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		L	V	S	K	L	C	H	E	K	G	A	L	V	C	I	D	G	T	F	A	.	.	.	.	.	.	.	.	.	.	T	P	L	N	Q	K	A	L	A	L	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	L	.	.	.	.	.	.	K	L	V	S	E	I
Template Known Secondary structure										T	T								T	T	T	.	.	.	.	.	.	.	.	.	.							T	T	T	T	T		S						T	T	T	T	T	T		S	S	S											.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240											.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.																							.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		R	N	L	H	H	I	L	G	G	A	L	N	P	N	A	A	Y	L	I	I	R	G	M	K	T	.	.	.	.	.	.	.	.	.	.	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	.	.	P	K	V	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K
Template Known Secondary structure									T																T	T	.	.	.	.	.	.	.	.	.	.																							.	.	S	S							T	T	S	T	T	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.											310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
								344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.																																.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Q	N	G	M	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	.	.	.	F	G	V	Y	A	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	N	V	A	G	M	T	P	D
Query Conservation		.	.	.	.	.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	D	L	L	T	T	A	K	F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	G	V	E	D	F	D
Template Known Secondary structure					S				S							S	S													S	S	S			S	S				S	S	S												T	T	S							T	T	T			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		384	.		.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	M	.	A	P	L	C	E	A	I	V	A	V
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	L	K	A	D	I	L	Q	A	L	D	S	I
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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