Job Description P00509 Confidence 99.68% Date Thu Jan 5 10:56:40 GMT 2012 Rank 228 Aligned Residues 294 % Identity 12% Template c1c4kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ornithine decarboxylase); PDBTitle: ornithine decarboxylase mutant (gly121tyr) Resolution 2.70 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	K	R	A	R	T	A	Q	T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	.	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N
Query Conservation																																																														.
Alig confidence																			.	.	.	.	.																.	.																						.
Template Conservation																			.	.	.	.	.																.	.
Template Sequence		V	A	A	E	K	H	A	A	R	V	Y	N	A	D	K	T	Y	.	.	.	.	.	F	V	L	G	G	S	S	N	A	N	N	T	V	T	S	.	.	A	L	V	S	N	G	D	L	V	L	F	D	R	N	N	H	K	S	V	Y	N	S	A	L	A	M	A	G	G	R	P	V	Y	L	Q	T	N	R	N	P	Y
Template Known Secondary structure												T	T		S				.	.	.	.	.			S	S												.	.					T	T							T	T										T	T	T	T													T	T
Template Predicted Secondary structure																			.	.	.	.	.																.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		155	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		H	T	L	.	.	.	.	.	.	.	.	D	F	D	A	L	I	N	S	L	N	E	A	Q	.	.	.	.	.	.	.	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R
Query Conservation					.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.														.	.	.	.	.	.	.												.												.	.	.
Template Conservation																																												.												.	.	.
Template Sequence		G	F	I	G	G	I	Y	D	S	D	F	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	H	E	.	.	.	V	V	K	R	I	G	H	L	C	D	Y	I	E	F	D	S	A	W	V	G	Y	E	Q
Template Known Secondary structure									G	G	G	S									T	T	T	S	S					T		S			B	S						S	B	.		T	T	S								.	.	.						G	G	G	B	S							T	T			G	G	G
Template Predicted Secondary structure																																												.												.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																														.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																																														.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S	Y	S	K	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	.	.	.	.	.	.	.	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A
Query Conservation			.	.	.	.																																														.	.	.	.	.	.	.
Alig confidence			.	.	.	.																												.	.																	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		F	I	P	M	M	R	N	S	S	P	L	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	.	.	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D	H	K	H	F	N	N	S	F	N	L	F	M	S	T	S	P	F	Y	P	M	Y
Template Known Secondary structure		S	S	G	G	G	G	G	G		T	T	S						T	T	S													.	.	S	S			T	T									G	G	G	T	T	S	T	T															S		S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R	Q	L	F	V	N	T	L	Q	E	K	G	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		A	A	L	D	V	N	A	A	M	Q	E	.	.	.	.	.	.	.	.	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D	G	D	T	E	D	M	A	N	N	I	D	Y	W	R	F	E	K
Template Known Secondary structure												S	.	.	.	.	.	.	.	.																									T	T		S	S			S	S		S			T	T			G	G	G	S						T	T		G	G	G	G	B			T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.									.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
																			336	.	.	.	340	.	.	.	.	.	.	.							.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.											.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	F	S	F	I	I	K	Q	N	G	M	.	.	.	.	.	.	F	S	F	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	.	.	.	.	.	.	.	.	.	.	Y	A	V	A	S	G	R	V	N	V	A	G	M	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		G	A	K	W	H	A	Y	E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	S	D	L	N	S	I	L	F	L	M	T	P	.	.	.	.	.	A	E	T	P
Template Known Secondary structure		T		T	T	T			T	T			T	T						T	T							S	S			T	T	T	T				S	S														T	T				S				S	S								T	.	.	.	.	.	T
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.						.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	A	P	L	C	E	A	I	V	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	M	N	N	L	I	T	Q	L	L	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions