|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | C | P | H | Y | Q | F | M | L | F | W | I | A | S | L | C | W | F | S | L | I | V | L | W | G | T | G | F | Y | S | L | L | F | Y | I | I | S | V | L | L | I | I | I | L | Y | T | L | Y | F | I | G | E | N | M | F | S | K | G | K | I | K | E | S | D | S | T | T | T | I | I | S | K | N | T | S | F | V | G | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |
|
|
|
|   |
|
| . |
|
|
|
|   |
|   |
|
|
|   |
Template Sequence |   |
V | D | K | Y | S | T | P | L | L | Y | L | K | G | F | H | A | L | Q | A | Y | R | I | G | H | W | L | W | N | Q | G | R | R | A | L | A | I | F | L | Q | N | Q | V | S | V | T | F | Q | V | D | I | H | P | A | A | K | I | G | R | G | I | X | L | D | H | A | T | G | I | . |
V | V | G | E | T | A | V | I | E | N | D |
Template Known Secondary structure |   |
|
|
| S |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |
| T | T |
|  |  |
| S | S |
|  |  |
| S |
| T | T |
| . |  |  |
| T | T |
|  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
. | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | S | G | E | K | I | I | I | H | G | K | I | N | G | N | I | N | T | N | N | G | V | V | F | I | D | K | G | G | V | V | N | G | R | V | L | C | E | K | M | I | L | N | G | E | L | Y | G | E | C | C | C | S | T | . |
L | D | V | Y | E | N | G | F | L | Q | G | E | V | S | Y | R | F | L | E | I | R | N | G | G |
Query Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|   |
|   |
|   |
|   |   | . |
|   |
|   |   |
|
|   |
|   |
|
|
|   |   |   |   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|
|
|
|   |   | . | . | . |   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|
|
|   |
|   |
|
|
Template Sequence |   |
V | S | I | L | Q | S | V | T | L | G | G | T | . |
. |
. |
G | K | S | G | G | D | R | H | P | K | I | R | E | G | V | X | I | G | A | G | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | L | G | N | I | E | V | G | R | G | A | K | I | G | A | G | S | V | V | L | Q | P | V | P | P | H | T | T | A | A | G | V | P | A |
Template Known Secondary structure |   |
|  |  |
| T | T |
|  |  |  |
|
| . | . | . | S | S | S |
| S | S |
| S |
|  |  |
| T | T |
|  |  |
| T | T |
|  | . | . | . | . | . | . | . | . | . |  |  | S | S |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S |
| B |
| T | T |
|  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
162 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
C | I | T | G | I |
Query Conservation |   |
  |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
Template Sequence |   |
R | I | V | G | K |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
242 | . | . | . | . |
  |