Job Description Q9JMT6 Confidence 28.70% Date Thu Jan 5 12:38:11 GMT 2012 Rank 11 Aligned Residues 131 % Identity 15% Template c3b8eC_ PDB info PDB header:hydrolase/transport protein Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump Resolution 3.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		Y	C	P	H	Y	Q	F	M	L	F	W	I	A	S	L	C	W	F	S	L	I	V	L	.	.	.	.	.	.	.	.	.	W	G	T	G	F	Y	S	L	L	F	Y	I	I	S	V	L	L	I	I	I	L	Y	T	L	Y	F	I	G	E	N	M	F	S	K	G	K	I	K	E	S	D	S	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	F	G	G	F	S	M	L	L	W	I	G	A	I	L	C	F	L	A	Y	G	I	Q	A	A	T	E	E	E	P	Q	N	D	N	L	Y	L	G	V	V	L	S	A	V	V	I	I	T	G	C	F	S	Y	Y	Q	E	A	K	S	S	K	I	M	E	S	F	K	N	M	V	P	Q	Q	A	L	V	I	R	N
Template Known Secondary structure		T	T	T	S	T	T											T	T	T	T	T	T	S			S	S			G	G	G	T	T	T																	T	T	T	T	T	S						S						T	S	S		S						B	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.		.	90	.	.	.	.	.	.		.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																	.	.					.									.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																	.	.					.									.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	T	T	T	I	I	S	K	N	T	S	F	V	G	D	I	S	.	.	S	G	E	K	.	I	I	I	H	G	K	I	N	.	G	N	.	I	N	T	N	N	G	V	V	F	I	D	K	G	G	V	V	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	C	E	K	M	I	L	N	G	E
Query Conservation		.																	.	.					.									.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																	.	.					.									.			.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		G	E	K	M	S	I	N	A	E	E	V	V	V	G	D	L	V	E	V	K	G	G	D	R	I	P	A	D	L	R	I	I	S	A	N	G	C	K	V	D	N	.	S	S	L	T	G	E	S	E	P	Q	T	R	S	P	D	F	T	N	E	N	P	L	E	T	R	N	I	A	F	F	S	T	N	C	V	E	G	T
Template Known Secondary structure		S	S						G	G	G			T	T							T	T	S	B			S															.					S			S						S	S			S	S	T	T	T	T		T	T				S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		129	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	G	E	C	C	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	G	I	V	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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