Job Description Q9JMT6 Confidence 25.29% Date Thu Jan 5 12:38:11 GMT 2012 Rank 15 Aligned Residues 130 % Identity 13% Template c2zxeA_ PDB info PDB header:hydrolase/transport protein Chain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		C	P	H	Y	Q	F	M	L	F	W	I	A	S	L	C	W	F	S	L	I	V	L	W	.	.	.	.	.	.	.	.	.	G	T	G	F	Y	S	L	L	F	Y	I	I	S	V	L	L	I	I	I	L	Y	T	L	Y	F	I	G	E	N	M	F	S	K	G	K	I	K	E	S	.	.	.	.	.	.	.	D	S
Query Conservation																									.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	G	G	F	S	I	L	L	W	I	G	A	I	L	C	F	L	A	Y	G	I	Q	A	A	T	E	D	E	P	A	N	D	N	L	Y	L	G	V	V	L	S	T	V	V	I	V	T	G	C	F	S	Y	Y	Q	E	A	K	S	S	R	I	M	D	S	F	K	N	M	V	P	Q	Q	A	L	V	I	R	D	G
Template Known Secondary structure		T	T	S	T																						S	S																													T												T	T	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90		.	.	.		.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.							.				.						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.							.				.						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	T	I	I	S	K	N	T	S	F	V	G	D	I	S	.	.	S	G	E	K	I	I	.	I	H	G	.	K	I	N	G	N	.	I	N	T	N	N	G	V	V	F	I	D	K	G	G	V	V	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	C	E	K	M	I	L	N	G	E	L
Query Conservation																		.	.							.				.						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.							.				.						.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		E	K	S	T	I	N	A	E	F	V	V	A	G	D	L	V	E	V	K	G	G	D	R	I	P	A	D	L	R	I	I	S	A	H	G	C	K	V	D	N	.	S	S	L	T	G	E	S	E	P	Q	T	R	S	P	E	F	S	S	E	N	P	L	E	T	R	N	I	A	F	F	S	T	N	C	V	E	G	T	A
Template Known Secondary structure								G	G	G			T	T							T	T		B			S															.					S			S						S	S				S	S	T	T	T		S	S				T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	E	C	C	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	V	V	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions