Job Description P23173 Confidence 2.65% Date Thu Jan 5 11:39:16 GMT 2012 Rank 35 Aligned Residues 87 % Identity 9% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	S	H	G	G	R	F	K	T	V	L	L	T	F	L	P	P	A	L	L	Y	L	I	F	P	N	G	F	I	Y	G	I	G	G	A	G	L	C	A	T	I	W	A	V	I	I	P	A	V	L	A	I	K	A	R	K	K	F	P	N	Q	M	F	T	V	W	G	G	N	L	I	P	A	I	V	I	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A
Template Known Secondary structure				S																						T	T											T																			S	S	T	T						T	T		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		397	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	V	I	L	C	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	L	V	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions