Return to main results Retrieve Phyre Job Id

Job DescriptionP45549
Confidence15.12%DateThu Jan 5 12:03:06 GMT 2012
Rank53Aligned Residues21
% Identity14%Templatec3v4gA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   318.320........ .330........
Predicted Secondary structure 

...........




Query SS confidence 










. . . . . . . . . . .









Query Sequence  RNLARLVEAMQ. . . . . . . . . . . PDDCLVVMAD
Query Conservation    

 

  
 ...........









Alig confidence 










...........









Template Conservation    

  

     
 
 











   
Template Sequence  QLIARMLDSLGKSEGILGVVAGDDTIFITPTL
Template Known Secondary structure 
GGGT
SS
T
Template Predicted Secondary structure 











Template SS confidence 































   106...110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions