 |
Job Description | P45549 | Confidence | 99.95% | Date | Thu Jan 5 12:03:06 GMT 2012 |
Rank | 33 | Aligned Residues | 136 |
% Identity | 24% | Template | c3igzB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; |
PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration
|
Resolution | 1.90 Å |
|
 |
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
. | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | W | Q | N | L | V | D | S | Q | R | I | M | D | I | T | L | N | E | F | N | T | H | P | T | A | F | I | C | T | N | I | Q | E | T | D | L | A | G | H | A | E | D | V | A | R | Y | A | E | R | L | Q | V | V | D | R | N | L | A | R | L | V | E | A | M | Q | . |
P | D | D | C | L | V | V | M | A | D | H | G | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|   |   |
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
F | N | E | K | P | R | M | Q | S | A | A | I | T | E | A | A | I | E | A | L | K | S | G | M | Y | N | V | V | R | I | N | F | P | N | G | D | M | V | G | H | T | G | D | L | K | A | T | I | T | G | V | E | A | V | D | E | S | L | A | K | L | K | D | A | V | D | S | V | N | G | V | Y | I | V | T | A | D | H | G | N |
Template Known Secondary structure |   |
G | G | G | S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |
|  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | B | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | |
|
|
|
. | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | T | I | G | H | S | H | H | T | R | E | V | V | P | V | L | V | Y | Q | Q | G | M | I | A | T | . |
. |
. |
. |
Q | L | G | V | R | T | T | L | S | D | V | G | A | T | V | C | E | F | F | R | A | P | P | P | Q | N | . |
G | R | S | F | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   | . |
|   |
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|
|
Template Sequence |   |
S | D | D | M | A | Q | R | D | K | K | G | K | P | M | K | D | G | N | G | N | V | L | P | L | T | S | H | T | L | S | P | V | P | V | F | I | G | G | A | G | L | D | P | R | V | A | M | R | T | D | L | P | A | A | G | L | A | N | V | T | A | T | F | I | N | L | L | G | F | E | A | P | E | D | Y | E | P | S | L | I |
Template Known Secondary structure |   |
T | T |
|
| B |
| B |
| T | T |
|
| B |
| B |
| T | T | S |
| B |
| B |
|
| S |
| B |
|
|
|  |  |  |  |  |  |
| T | T | S |
| T | T |  |  |  |
| S | S |
| T | T |
| B | T |  |  |  |  |  |  |  |  |  |  |  | T | B |
|
|
| T | T | S |
|
|
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|