Job Description P45549 Confidence 100.00% Date Thu Jan 5 12:03:06 GMT 2012 Rank 4 Aligned Residues 328 % Identity 12% Template c3b5qB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		R	F	V	V	L	V	I	D	S	F	G	V	G	A	M	K	D	V	T	L	V	R	P	Q	D	A	G	A	N	T	C	G	H	I	L	S	Q	L	P	H	L	Q	L	P	T	L	E	T	L	G	L	I	N	A	L	G	Y	A	P	G	D	M	Q	P	S	D	S	A	T	W	G	V	.	A	E	L	Q	H	E	G
Query Conservation																																																																										.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.																																							.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template Sequence		N	F	L	I	I	Q	C	D	H	L	T	.	.	.	.	.	.	.	.	.	.	.	Q	R	V	V	G	.	.	.	.	.	.	.	A	Y	G	Q	T	Q	G	C	T	L	P	I	D	E	V	A	S	R	G	V	I	F	S	N	A	Y	V	G	C	P	L	S	Q	P	S	R	A	A	L	W	S	G	X	X	P	H
Template Known Secondary structure									T	T			.	.	.	.	.	.	.	.	.	.	.	T	T	T	S	G	.	.	.	.	.	.	.	G	G	S	S		S	S	S											S			B	S		B	B		S		S	S											T	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.												.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	F	M	G	H	Q	E	I	L	G	T	R	P	L	P	P	L	R	M	P	F	R	D	V	I	D	R	V	E	Q	A	L	V	S	A	G	W	Q	V	E	R	R	G	D	D	L	Q	F	L	W	V	N	Q	A	V	A	I	G	D	N	L	E	A	D	L	G	Q	V	Y	N	I	T	A	N	L	S	V	I
Query Conservation
Alig confidence									.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Sequence		Q	T	N	V	R	S	N	.	.	.	.	.	.	.	S	S	E	P	V	N	T	R	L	P	E	N	V	P	T	L	G	S	L	F	S	E	S	G	Y	E	A	V	H	F	G	K	T	H	D	X	G	S	L	R	G	F	K	H	K	E	P	V	A	K	P	F	T	D	P	E	F	P	V	.	.	.	.	.	.	.
Template Known Secondary structure				T			S	S	.	.	.	.	.	.	.			T	T	T	S					T	T	S										T	T												T	T	T	T	T	T	S													S	S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	D	A	I	K	I	G	R	I	V	R	E	Q	V	Q	V	G	R	V	I	T	F	G	G	L	L	T	D	S	Q	R	I	L	D	A	A	E	S	K	E	G	R	F	I	G	I	N	A	P	R	S	G	A	Y	D	N	G	F	Q	V	V	H	M	G	Y	G	V	D	E	K	V	Q	V	P	Q	K	L	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	D	S	F	L	D	V	G	T	C	E	D	A	V	A	Y	L	S	N	P	P	K	E	P	F	I	C	I	A	D	F	Q	N	P	H	N	I	C	G	F	I	G	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S			S	S	S									T	T	T	T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	V	P	T	V	L	V	G	K	V	A	D	I	V	N	N	P	Y	G	V	S	W	Q	N	L	V	D	S	Q	R	I	M	D	I	T	L	N	E	F	N	T	H	P	T	A	F	I	C	T	N	I	Q	E	T	D	L	A	G	H	A	E	D	V	A	R	Y	A	E	R	L	Q	V	V	D	R	N	L	A
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		A	G	V	H	T	D	R	P	I	S	G	P	L	P	E	L	P	D	N	F	D	V	E	D	W	S	N	I	P	T	P	V	Q	Y	I	C	C	S	H	R	R	X	T	.	.	.	.	.	.	.	.	Q	A	A	H	W	N	E	E	N	Y	R	H	Y	I	A	A	F	Q	H	Y	T	K	X	V	S	K	Q	V	D
Template Known Secondary structure			S	S							S	S							T	T		S		S		G	G	G	S						T										.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		322	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																				.	.	.	.	.	.	.																			.							.	.	.
Query SS confidence									.	.	.	.	.																				.	.	.	.	.	.	.																			.							.	.	.
Query Sequence		R	L	V	E	A	M	Q	.	.	.	.	.	P	D	D	C	L	V	V	M	A	D	H	G	N	D	P	T	I	G	H	.	.	.	.	.	.	.	S	H	H	T	R	E	V	V	P	V	L	V	Y	Q	Q	G	M	I	.	A	T	Q	L	G	V	.	.	.	R	T	T	L	S	D	V	G	A	T	V	C	E	F
Query Conservation									.	.	.	.	.																				.	.	.	.	.	.	.																			.							.	.	.
Alig confidence									.	.	.	.	.																				.	.	.	.	.	.	.																			.							.	.	.
Template Conservation
Template Sequence		S	V	L	K	A	L	Y	S	T	P	A	G	R	N	T	I	V	V	I	X	A	D	H	G	D	G	X	A	S	H	R	X	V	T	K	H	I	S	F	Y	D	E	X	T	N	V	P	F	I	F	A	G	P	G	I	K	Q	Q	K	K	P	V	D	H	L	L	T	Q	P	T	L	D	L	L	P	T	L	C	D	L
Template Known Secondary structure								T	T	S	T	T	G	G	G								S					T	T	G	G	G			S		S	S								B							S	T	T					S	S		B		S	S		B
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		386	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		F	R	A	P	P	P	.	.	Q	N	G	R	S	F	L	S	S	L	R	F	A	G
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		A	G	I	A	V	P	A	E	K	A	G	I	S	L	A	P	T	L	R	G	E	K
Template Known Secondary structure			T					T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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