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Job DescriptionP45549
Confidence99.95%DateThu Jan 5 12:03:06 GMT 2012
Rank31Aligned Residues339
% Identity16%Templatec2w0yB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEG
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Template Sequence  ANAIAYIVDGMGQTQISAARYLNAYKTAPERFP. . LNVSPAETPTGFDAFSSRGSMTTFPDDPYETTTDSAAAATAFASG
Template Known Secondary structure  STT


TTTTT..GGGSTTTS

TGGGSS




SS
SS

S
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   48.50.........60.........70.........80 .........90.........100.........110.........120.....
 
   82.......90.........100.........110.........120...... ...130.........140.........150........
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Query Sequence  GDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRG. . . DDLQFLWVNQAVAIGDNLEADLGQVYNITANL
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Template Sequence  VKTY. . . . . . NGAIGGVQTSGGGFQRVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQTEIARQYIEETQP
Template Known Secondary structure 



......TT
BSTTT


T
TTS

BSSTT
TT

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   126... 130.........140.........150.........160.........170.........180.........190.........
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  SVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQ
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Template Sequence  DVILGGQRRDFEAD. . . . . . . . . . . . . . . . ASNGGTLVDAARDNGYTIAETAAELDAVDD. . PPVLGLFSQESHLDYYLD
Template Known Secondary structure  S
GGGGGSB................
TTSSBTT

S

S..S


SSS



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   200.........210... ......220.........230.........240... ......250.........260.
 
   239240.........250.........260.........270.........280..... ....290.........300.........310......
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Query Sequence  KLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTH. . PTAFICTNIQETDLAGHAEDVARYAERLQVV
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Template Sequence  RKND. . . . . . . . . . . . . . . . . . . . . PENTQPNLDAMVDAGVDLLSGDPDKGFFLLVESGRVDHAGHANYPAQVAEQY. EA
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SS


T
TT.
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   262... ....270.........280.........290.........300.........310....... ..
 
   317..320........ .330.........340..
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Query Sequence  DRNLARLVEAMQ. . . PDDCLVVMADHGND. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TQVAGQLVEYAETTAEPTFLVSTGDHECGGLTLGRDSPYEVEYDVLAAQKATTSRLRDLLAGVRSADELESIVAAHTGIT
Template Known Secondary structure 
SS
SSS

BSS
SS
S


T

S
TT


SS

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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   343......350.........360.........370.........380.........390
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . PTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPP
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Template Sequence  ALTDREVAKLRDAPGSISTILAERAGIAFTTDGHTGTDVPVFAHGPN. . AARFDAARDNTAVADALAAALGVSL
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GGGT
B


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STT..GGGGSSTTT


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   402.......410.........420.........430.........440........ .450.........460.........470...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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