Job Description P45549 Confidence 99.96% Date Thu Jan 5 12:03:06 GMT 2012 Rank 27 Aligned Residues 310 % Identity 13% Template c2iucB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	V	V	L	V	I	D	S	F	G	V	G	A	M	K	D	V	T	L	V	R	P	Q	D	A	G	A	N	T	C	G	H	I	L	S	Q	L	P	H	L	Q	L	P	T	L	E	T	L	G	L	I	N	A	L	G	Y	A	P	G	D	M	Q	P	S	D	S	A	T	W	G	V	A	E	L	Q	H	E	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		K	N	V	I	L	L	I	S	D	G	A	G	L	S	Q	I	S	S	T	F	Y	F	K	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	N	Y	T	Q	F	K	N	I	G	.	.	L	I	K	T	S	S	S	R	E	D	V	T	D	S	A	S	G	A	T	A	F	S	C	G
Template Known Secondary structure		S								T	B								G	G	G	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	G						.	.							S	S		S	S													S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																			60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		G	D	T	F	M	G	H	Q	E	I	L	G	T	R	P	L	P	P	L	R	M	P	F	R	D	V	I	D	R	V	E	Q	A	L	V	S	A	G	W	Q	V	E	R	R	G	.	.	.	D	D	L	Q	F	L	W	V	N	Q	A	V	A	I	G	D	N	L	E	A	D	L	G	Q	V	Y	N	I	T	A	N	L
Query Conservation																																															.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	T	Y	N	A	A	I	G	.	.	.	.	.	.	.	.	.	.	V	A	D	D	S	T	A	V	K	S	I	V	E	I	A	A	L	N	S	I	K	T	G	V	V	A	T	S	S	I	T	H	A	T	P	A	S	F	Y	A	H	A	L	N	R	G	L	E	E	E	I	A	M	D	M	T	E	S	D	L	D
Template Known Secondary structure						T	T		B	S	.	.	.	.	.	.	.	.	.	.	B		T	T	S		B											T	T											T	T	S						T	T			B	S		T	T										T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.											.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	S	F	D	D	A	I	K	I	G	R	I	V	R	E	Q	V	Q	V	G	R	V	I	T	F	G	G	L	L	T	D	S	Q	R	I	L	D	A	A	E	S	K	E	G	R	F	I	G	I	N	A	P	R	S	G	A	Y	D	N	G	F	Q	V	V	H	M	G	Y	G	V	D	E	K	V	Q	V	P	Q
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template Sequence		F	F	A	G	G	G	L	N	Y	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	D	S	K	D	V	L	A	I	L	K	G	N	Q	F	T	I	N	T	T	G	L	T	D	F	S	S	I	A	S	N	R	K	M	G	F	L	L	A	D	E	.	.	.	.	.	.	.	.
Template Known Secondary structure								T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T					S	S					S	T	T	T	T	T		S							S	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.																			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		K	L	Y	E	A	G	V	P	T	V	L	V	G	K	V	A	D	I	V	N	N	P	Y	G	V	S	W	Q	N	L	V	D	S	Q	R	I	M	D	I	T	L	N	E	F	N	T	H	P	T	A	F	I	.	C	T	N	I	Q	E	T	D	L	A	G	H	A	E	D	V	A	R	Y	A	E	R	L	Q	V	V	D
Query Conservation																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	P	T	M	E	K	G	R	G	N	F	L	S	A	A	T	D	L	A	I	Q	F	L	S	K	D	N	S	A	F	F	I	M	S	E	G	S	Q	I	D	W	G	G	H	A	N	N	A	S	Y	L	I	S	E	I	N	D	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				T	T	T	T		T	T														T	G	G	G										T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340																					.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	L	A	R	L	V	E	A	M	Q	.	.	P	D	D	C	L	V	V	M	A	D	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	P	T	I	G	H	S	H	H	T	R	E	V	V	P	V	L	V	Y	Q	Q	G	M	I	A	T	Q	L	G	V	R	T	T	L
Query Conservation													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																																																						.	.
Template Sequence		D	A	I	G	T	A	L	A	F	A	K	S	D	G	N	T	L	V	I	V	T	S	D	H	E	T	G	G	F	T	L	A	A	K	S	N	K	S	E	Y	S	D	Y	T	E	I	G	P	T	F	S	T	G	G	H	S	A	T	L	I	P	V	F	A	Y	G	P	G	.	.	S	E	E	F	I	G	I	Y	E	N
Template Known Secondary structure															S	S								S				T	T		B																			B		S		S	S												S	T	T	.	.	G	G	G	G						T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	V	G	A	T	V	C	E	F	F	R	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	F	H	K	I	L	K	V	T	K	W	N
Template Known Secondary structure		T											T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions