Job Description P62672 Confidence 26.89% Date Thu Jan 5 12:07:46 GMT 2012 Rank 56 Aligned Residues 40 % Identity 13% Template c3mu3A_ PDB info PDB header:immune system Chain: A: PDB Molecule:protein md-1; PDBTitle: crystal structure of chicken md-1 complexed with lipid iva Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.
Predicted Secondary structure																			.	.	.																			.	.	.
Query SS confidence																			.	.	.																			.	.	.
Query Sequence		I	A	P	G	E	E	Y	Q	Y	T	S	G	A	I	I	E	T	.	.	.	P	L	G	T	M	Q	G	H	Y	E	M	I	D	E	N	G	V	P	.	.	.	F	S	I	D	I
Query Conservation																			.	.	.																			.	.	.
Alig confidence																			.	.	.																			.	.	.
Template Conservation
Template Sequence		K	K	K	G	E	H	L	Y	Y	E	G	P	I	T	L	G	I	K	E	I	P	Q	R	D	Y	T	I	T	A	R	L	T	N	E	D	R	A	T	V	A	C	A	D	F	T	V
Template Known Secondary structure				T	T												S	S	S	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions