 |
Job Description | P62672 | Confidence | 13.10% | Date | Thu Jan 5 12:07:46 GMT 2012 |
Rank | 88 | Aligned Residues | 48 |
% Identity | 10% | Template | c1kbwA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:major outer membrane protein pan 1; |
PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae
|
Resolution | 2.40 Å |
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | T | V | T | I | R | N | L | G | R | A | . |
. |
. |
P | V | Q | L | L | G | R | Y | W | L | I | T | N | G | N | G | R | E | T | E | V | Q | G | E | G | V | V | G | V | Q | P | L | I | A | P | G | E | E | Y | Q |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |   |   |   | . | . | . |   |
|
|
|   |
|
|   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   | . | . | . | . |   |
|   |
|
|   |
|   |   |
Template Sequence |   |
T | V | R | M | Y | V | G | N | G | G | P | N | L | V | S | S | F | H | V | I | G | E | I | F | D | K | V | Y | V | E | G | G | K | L | I | N | E | N | V | Q | S | T | . |
. |
. |
. |
I | V | P | A | G | G | S | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  | T |
|
| B | S |  |  |  | G | G | G | S | S |
|  |  |
| S | B | S |  |  | . | . | . | . |  |  |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
|
|
. | . | . | . | . | 270 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|