Return to main results Retrieve Phyre Job Id

Job DescriptionP46141
Confidence2.04%DateThu Jan 5 12:04:09 GMT 2012
Rank44Aligned Residues20
% Identity25%Templatec2sivD_
PDB info PDB header:envelope glycoproteinChain: D: PDB Molecule:siv gp41 glycoprotein; PDBTitle: siv gp41 core structure
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.....
Predicted Secondary structure 





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Query Sequence  NITLTNNDSLTEDEETTWSL
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Template Sequence  NITALLEEAQIQQEKNMYEL
Template Known Secondary structure 
Template Predicted Secondary structure 

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   641........650.........660
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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