 |
Job Description | P46141 | Confidence | 2.04% | Date | Thu Jan 5 12:04:09 GMT 2012 |
Rank | 44 | Aligned Residues | 20 |
% Identity | 25% | Template | c2sivD_ |
PDB info |
PDB header:envelope glycoprotein | Chain: D: PDB Molecule:siv gp41 glycoprotein; |
PDBTitle: siv gp41 core structure
|
Resolution | 2.20 Å |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | T | L | T | N | N | D | S | L | T | E | D | E | E | T | T | W | S | L |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
N | I | T | A | L | L | E | E | A | Q | I | Q | Q | E | K | N | M | Y | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
641 | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|