 |
Job Description | P77554 | Confidence | 95.68% | Date | Thu Jan 5 12:30:31 GMT 2012 |
Rank | 144 | Aligned Residues | 72 |
% Identity | 19% | Template | d4ubpc1 |
SCOP info | Composite domain of metallo-dependent hydrolases
| Composite domain of metallo-dependent hydrolases
| alpha-Subunit of urease
|
Resolution | 1.55 |
|
 |
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 100 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
A | A | V | A | G | T | L | N | C | E | A | N | N | T | M | K | I | T | D | P | H | Y | Y | L | D | N | V | L | L | E | T | G | F | D | Y | E | N | G | V | A | V | Q | T | R | T | A | R | Q | T | V | E | I | Q | D | G | K | I | V | A | L | R | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | H | P | D | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |
Template Sequence |   |
K | V | L | R | E | G | M | G | E | N | G | T | Y | T | R | T | E | N | V | L | D | L | L | L | T | N | A | L | I | L | D | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | I | Y | K | A | D | I | G | V | K | D | G | Y | I | V | G | I | G | K | G | G | N | P | D | I | M | D | G | V | T | P | N | M | I | V | G | T |
Template Known Secondary structure |   |
| S |
| S | B | T | T | T | B |
| S | S |
|
| T | T | T | T | B |
| S |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| B |
| T | T | T |
| T | T |
|
| T | T |
| B |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | P | H | Y | D | A | G | G | K | L | M | L |
Query Conservation |   |
  |   |   |
|
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
A | T | E | V | I | A | A | E | G | K | I | V | T |
Template Known Secondary structure |   |
T |
|  |  |  |  |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|