Phyre 2 alignment of P77554 with d2p9ba2

Job Description P77554
Confidence 99.47% Date Thu Jan 5 12:30:31 GMT 2012

Rank 74 Aligned Residues 259

% Identity 14% Template d2p9ba2

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Imidazolonepropionase-like

Resolution 1.70

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence	P	G	L	I	N	A	H	T	H	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	X	A	A	T	V	K	H	N	A	T	T	L	L	E	S	G	V	T	T	I	R	T	L	G	.	.	D	V	G	Y	E	V	V
Template Known Secondary structure										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T							S		.	.		S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
	71	.	.	.	.	.	.	.	.	80	.	.																																			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.

	195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.												.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	.	.	.	.	.	.	.	.	.	.	.	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	.	.	.	.	.	P	T	S	V	D	G	A	M	E	K	S	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence	T	L	R	D	Q	I	D	A	G	Q	I	L	G	P	R	I	L	A	S	G	P	L	X	A	I	P	E	G	H	G	A	P	L	I	A	L	T	S	G	T	P	E	E	A	R	T	A	V	A	Q	N	L	K	A	G	V	N	A	I	K	I	A	A	T	G	G	V	T	D	A	Q	E	I	Q	X	S	V	E	Q	X
Template Known Secondary structure								T	T	S	S										S							S	S									S																T	T		S							S			T	T	S
Template Predicted Secondary structure
Template SS confidence
	144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

	259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.														.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	A	I	C	D	E	A	H	Q	Y	G	V	I	V	G	A	H	A	Q	S	P	E	G	V	R	R	S	L	L	A	G	V	D	T	I	E	H	G	S	V	L	D	D	E	L	I	G	X	F	R	H	N	P	N	A	L	R	G	Y	S	A	L	I	P	T	L	S	A	G	L	P	L	T	L	L	G	Q	D	V	T
Template Known Secondary structure										T	T									S											T		S																				T	T	S	T	T	S																	S
Template Predicted Secondary structure
Template SS confidence
	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

	326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D
Query Conservation
Alig confidence							.																																							.	.	.																.	.	.	.
Template Conservation							.																																							.	.	.																.	.	.	.
Template Sequence	G	I	T	D	I	Q	.	L	E	N	S	K	N	V	V	G	G	X	V	S	G	A	R	Q	A	H	E	A	G	L	X	I	G	V	G	T	D	T	G	X	T	F	V	P	Q	.	.	.	Y	A	T	W	R	E	L	E	L	L	V	A	Y	A	G	.	.	.	.	F	S	P	A	E	A	L	H	A	A	T	A	V
Template Known Secondary structure							.																					T	T			B						T	T	S	T	T	S		T	.	.	.	T															.	.	.	.											T
Template Predicted Secondary structure							.																																							.	.	.																.	.	.	.
Template SS confidence
	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.

	406	.	.		.	410	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence	V	L	P	.	L	N	E	K	G	E	R	V	W
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence	N	A	S	I	L	G	V	D	A	E	T	G	S
Template Known Secondary structure					T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
	382	.	.	.	.	.	.	.	390	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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