Job Description P77554 Confidence 99.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 97 Aligned Residues 268 % Identity 12% Template d2fvka2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.40

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	.	.	.	.	.	N	I	E	P	V
Query Conservation																																																																								.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	I	D	A	H	V	H	V	D	E	P	L	K	L	L	G	D	V	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	H	A	T	R	S	A	V	A	G	G	T	T	T	V	V	A	F	S	T	Q	D	V	S	K	K	G	P	S
Template Known Secondary structure								B					T	T		T	T	S			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T												T	T			S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	.	.	.	.	.	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.
Template Conservation
Template Sequence		A	L	A	E	S	V	K	L	D	V	D	E	Y	S	E	Q	T	L	Y	C	D	Y	G	L	H	L	I	L	F	Q	I	E	K	P	S	V	E	A	R	E	L	L	D	V	Q	L	Q	A	A	Y	N	D	Y	G	V	S	S	V	M	F	M	T	Y	P	G	L	Q	I	S	D	Y	D	I	M	S	A	M	Y	A	T
Template Known Secondary structure															T	T	S			S	S													S	S																							B			B	S	S	S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.																								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Y	D	K	G	V	D	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		R	K	N	G	F	T	T	M	L	H	A	E	N	G	D	M	V	K	W	M	I	E	A	L	E	E	Q	G	L	T	D	A	Y	Y	H	G	V	S	R	P	S	I	V	E	G	E	A	T	N	R	A	I	T	L	A	T	T	M	D	T	P	I	L	F	V	H	V	S	S	.	.	.	.	.	.	P	Q	A	A	E
Template Known Secondary structure				T	T		B				B																	T	T			S	T	T					T	S																			T	T							S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																																																340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	K	Q	A	Q	T	K	G	L	K	V	Y	A	E	T	C	P	Q	Y	A	L	L	S	D	A	I	T	R	C	H	G	V	G	I	D	L	S	S	I	S	E	S	P	F	T	N	P	D	D	R	F	I	G	S	K	Y	I	C	S	P	P	I	R	P	E	G	T	Q	K	S	I	W	K	G	M	N	N	G	T
Template Known Secondary structure										T																G	G	G	G	S					S			G	G	G	S	S	S	S	T	T	T		T	T		T	T	G	G	G	G	G			S	S					T	T	S											T	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		356	.	.	.	360	.	.	.	.	.																										.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																.
Query Sequence		K	V	M	T	G	T	D	S	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	.	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																.
Template Conservation
Template Sequence		F	T	I	V	G	S	D	H	C	S	Y	N	Y	Y	E	K	T	S	T	A	S	K	H	R	A	F	D	P	E	N	N	K	N	G	E	F	R	Y	I	P	N	G	L	P	G	V	C	T	R	M	P	L	L	Y	D	Y	G	Y	L	R	G	N	L	T	S	M	M	K	L	V	E	I	Q	C	T	N	P	A	K	V
Template Known Secondary structure			S						B				B	S	S			S	S	T	T	B	G	G	G	G			G	G	G	T			S		G	G	G	S				B			T	T	T									T	T	T	T	T	S	S	S										T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		409	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	K	G	E	R	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	M	Y	P	Q	K	G	S
Template Known Secondary structure		T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions