Phyre 2 alignment of P77554 with d2f6ka1

Job Description P77554
Confidence 90.85% Date Thu Jan 5 12:30:31 GMT 2012

Rank 154 Aligned Residues 271

% Identity 15% Template d2f6ka1

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like

Resolution 2.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	.
Query Conservation																																																																																.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																																												.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	D	F	H	T	H	Y	L	P	.	.	.	.	.	.	.	.	.	.	.	T	S	Y	V	E	A	L	K	R	H	V	P	G	D	P	D	G	W	P	T	P	E	W	T	P	Q	L	T	L	N	F	X	R	D	N	D	I	S	Y	S	I	L	S	L	S	S	P	H	V	N	F	G	D	K	A	E	T	I	R	L
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.													S	S	G	G	G	S																	T	T										S	S		S		S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	4	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

						197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure	.	.	.	.	.
Query SS confidence	.	.	.	.	.
Query Sequence	.	.	.	.	.	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G
Query Conservation	.	.	.	.	.
Alig confidence	.	.	.	.	.															.	.
Template Conservation																				.	.
Template Sequence	V	E	A	A	N	D	D	G	K	S	L	A	Q	Q	Y	P	D	Q	L	.	.	G	Y	L	A	S	L	P	I	P	Y	E	L	D	A	V	K	T	V	Q	Q	A	L	D	Q	D	G	A	L	G	V	T	V	P	T	N	S	R	G	L	Y	F	G	S	P	V	L	E	R	V	Y	Q	E	L	D	A	R	Q	A	I
Template Known Secondary structure																T	T	T		.	.								T	T															T	S			S						S			T	T			T	T		G	G	G									T	T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

	272	.	.	.	.	.	.	.	280																					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	V	D	I	H	L	H	E	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																		.	.
Template Sequence	V	A	L	H	P	N	E	P	A	I	L	P	K	N	V	D	I	D	L	P	V	P	L	L	G	F	F	X	D	T	T	X	T	F	I	N	X	L	K	Y	H	F	F	E	K	Y	P	N	I	.	.	K	V	I	I	P	H	A	G	A	F	L	G	I	V	D	D	R	I	A	Q	Y	A	Q	K	V	Y	Q	V	D
Template Known Secondary structure									S				T	T	S	S	T	T																						T	T						T	T		.	.					S	G	G	G	T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

	332						.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																						.	.
Query SS confidence		.	.	.	.	.																						.	.
Query Sequence	I	.	.	.	.	.	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	.	.	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G
Query Conservation		.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.																						.	.										.	.	.	.	.	.																			.	.	.
Template Conservation																																							.	.	.	.	.	.																			.	.	.
Template Sequence	V	Y	D	V	X	H	H	V	Y	F	D	V	A	G	A	V	L	P	R	Q	L	P	T	L	X	S	L	A	Q	P	E	H	L	L	Y	G	S	D	.	.	.	.	.	.	I	P	Y	T	P	L	D	G	S	R	Q	L	G	H	A	L	A	T	.	.	.	T	D	L	L	T	N	E	Q	K	Q	A	I	F	Y	D
Template Known Secondary structure								S						S	S		T	T	T						T	T	T	S		G	G	G							.	.	.	.	.	.	T	T	T	S															.	.	.		T	T	S										T
Template Predicted Secondary structure																																							.	.	.	.	.	.																			.	.	.
Template SS confidence
	229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

	405	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	V	L	P	L	N	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence	N	A	H	R	L	L	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	300	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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