Phyre 2 alignment of P77554 with d2dvta1

Job Description P77554
Confidence 95.08% Date Thu Jan 5 12:30:31 GMT 2012

Rank 146 Aligned Residues 274

% Identity 10% Template d2dvta1

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like

Resolution 1.70

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	M	Q	G	K	V	A	L	E	E	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	P	E	T	L	Q	D	S	A	G	F	V	P	G	D	Y	W	K	E	L	Q	H	R	L	L	D	I	Q	D	T	R	L	K	L	M	D	A	H	G	I	E	T	M	I	L	S	L	N	A	P	A	V	Q	A	I
Template Known Secondary structure			S									.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G	T	T	T	S		S	S												S	S	S									T	T										S	S	G	G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.														.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

	194	.	.	.	.	.	200	.									.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Query Sequence	K	N	L	Q	N	L	Q	A	.	.	.	.	.	.	.	.	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	.	.	.	.	.	.	.	A	M	E	K	S	L
Query Conservation									.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence	P	D	R	R	K	A	I	E	I	A	R	R	A	N	D	V	L	A	E	E	C	A	K	R	P	D	R	F	L	A	F	A	A	L	P	L	Q	D	P	D	A	A	T	E	E	L	Q	R	C	V	N	D	L	G	F	V	G	A	L	V	N	G	F	S	Q	E	G	D	G	Q	T	P	L	Y	Y	D	L	P	Q	Y
Template Known Secondary structure																									T	T	T									T	T	S														T	T									S	S	B			T	T			S		B		T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
	68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

	259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	P	F	W	G	E	V	E	K	L	D	V	P	F	Y	L	H	P	R	N	P	L	P	Q	D	S	R	I	Y	D	G	H	P	W	L	L	G	P	T	W	A	F	A	Q	E	T	A	V	H	A	L	R	L	M	A	S	G	L	F	D	E	H	P	R	L	N	I	I	L	G	H	M	G	E	G	L	P	Y	M	M
Template Known Secondary structure											T												G	G	G		G	G	G	T	T		G	G	G	S	G	G	G	T																T	T						T	T						S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
	148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	.	.	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence	W	R	I	D	H	R	N	A	W	V	K	L	P	P	R	Y	P	A	K	R	R	F	M	D	Y	F	N	E	N	F	H	I	T	T	S	G	N	F	R	T	Q	T	L	I	D	A	I	L	E	I	G	A	D	R	I	L	F	S	T	D	.	.	.	.	.	.	W	P	F	E	N	I	D	H	A	S	D	W	F	N
Template Known Secondary structure						T	T	T	T			S			S	S	S		S	S															T	T												T	T	T		G	G	G							.	.	.	.	.	.	T	T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
	228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.

	383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence	A	T	.	.	.	.	.	.	.	S	I	A	E	A	D	R	V	K	I	G	R	T	N	A	R	R	L	F	K	L	D
Template Known Secondary structure		S	.	.	.	.	.	.	.	S	S										T							T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
	302	.								.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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