Phyre 2 alignment of P77554 with d2amxa1

Job Description P77554
Confidence 98.70% Date Thu Jan 5 12:30:31 GMT 2012

Rank 111 Aligned Residues 281

% Identity 12% Template d2amxa1

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase

Resolution 2.02

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	114	.	.	.	.	.	120	.	.	.	.	.	.	.																								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	P	T	T	R	D	M	H	I	H	L	D	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation				.																																																															.
Template Sequence	I	P	K	.	V	E	L	H	C	H	L	D	L	T	F	S	A	E	F	F	L	K	W	A	R	K	Y	N	L	Q	P	N	M	S	D	D	E	I	L	D	H	Y	L	F	T	K	E	G	K	S	L	A	E	F	I	R	K	A	I	S	V	S	D	L	Y	R	.	D	Y	D	F	I	E	D	L	A	K	W	A	V
Template Known Secondary structure	S			.					B	B	G	G	G														T	T			T	T	S													S	T	T														G	G	G			.	S
Template Predicted Secondary structure				.																																																															.
Template SS confidence
	49	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.

	171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	.	.	.	.	.	.	.	.	.	.	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	I	E	K	Y	K	E	G	V	V	L	M	E	F	R	Y	S	P	T	F	V	S	S	S	Y	G	L	D	V	E	L	I	H	K	A	F	I	K	G	I	K	N	A	T	E	L	L	N	N	K	I	H	V	A	L	I	C	I	S	D	T	G	H	A	A	A	S	I	K	H	S	G	D	F	A	I	K	H	K	H	D
Template Known Secondary structure						T	T																T	T	T																					T	T	T	S	S													S						T	T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V
Query Conservation
Alig confidence												.	.																																.	.	.	.	.	.																								.
Template Conservation												.	.																																.	.	.	.	.	.																								.
Template Sequence	F	V	G	F	D	H	G	G	R	E	I	.	.	D	L	K	D	H	K	D	V	Y	H	S	V	R	D	H	G	L	H	L	T	V	H	A	G	E	D	A	T	L	P	N	.	.	.	.	.	.	L	N	T	L	Y	T	A	I	N	I	L	N	V	E	R	I	G	H	G	I	R	V	S	.	E	S	D	E	L	I
Template Known Secondary structure								S	S			.	.			G	G	G										T	T								S			T	T		S	S	.	.	.	.	.	.	S									T	S			S						G	G	G	G	.	G
Template Predicted Secondary structure												.	.																																.	.	.	.	.	.																								.
Template SS confidence
	207	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.

	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	.	.	.	.	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																			.	.	.	.	.																				.	.	.	.
Template Conservation																																																.	.	.	.	.																				.	.	.	.
Template Sequence	E	L	V	K	K	K	D	I	L	L	E	V	C	P	I	S	N	L	L	L	N	N	V	K	S	M	D	T	H	P	I	R	K	L	Y	D	A	G	V	K	V	S	V	N	S	D	D	.	.	.	.	.	P	G	M	F	L	S	N	I	N	D	N	Y	E	K	L	Y	I	H	L	.	.	.	.	N	F	T	L	E
Template Known Secondary structure							T													T	T	S	S	S		S	T	T		T							T	T								B		.	.	.	.	.					T															.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.																				.	.	.	.
Template SS confidence
	278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.

	397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	F	M	I	M	N	N	W	A	F	E	K	S	F	V	S	D	D
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
	349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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