Job Description P77554 Confidence 82.05% Date Thu Jan 5 12:30:31 GMT 2012 Rank 160 Aligned Residues 255 % Identity 18% Template d1ejxc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.60

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	T	H	I	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	P	Q	Q	A	E	E	A	L	V	S	G	V	T	T	M	V	G	G	G	T	G	P	A	A	G	T	H	A	T	T	C	T	P	G	P	W	Y	I	S
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T								T	T										S	S	S						S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1131	.	.	.	.	.	.																																	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H
Query Conservation
Alig confidence																									.	.	.	.	.	.	.														.	.	.			.
Template Conservation																									.	.	.	.	.	.	.														.	.	.			.
Template Sequence		R	M	L	Q	A	A	D	S	L	P	V	N	I	G	L	L	G	K	G	N	V	S	Q	.	.	.	.	.	.	.	P	D	A	L	R	E	Q	V	A	A	G	V	I	.	.	.	G	L	.	I	H	E	D	W	G	A	T	P	A	A	I	D	C	A	L	T	V	A	D	E	M	D	I	Q	V	A	L	H	S	D
Template Known Secondary structure								T	T	S	S	S					B						S	S	.	.	.	.	.	.	.											T		S	.	.	.	B		.		B	G	G	G																		T		B				B
Template Predicted Secondary structure																									.	.	.	.	.	.	.														.	.	.			.
Template SS confidence
		1179	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.								.	.	.	.	.	.	.	.	1210	.	.	.	.				.	.		.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.
		278	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	T	P	A	.	.	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P
Query Conservation							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																																									.
Template Sequence		T	L	N	E	S	G	F	V	E	D	T	L	A	A	I	G	G	R	T	I	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	T	A	C	A	H	P	N	I	L	P	S	S	T	N	P	T	L	P	Y	T	L	N	T	I	D	E	H	L	D	M	L	M	V	C	.	V	A	F	A	E	S	R	I
Template Known Secondary structure		T	T		S	S											T	T						S	S	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G		T	T							S	T	T	S	S		B	T	T													.								S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1249	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.		1320	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.								.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.																	.
Query SS confidence																																																							.	.	.	.	.	.	.																	.
Query Sequence		I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	.	.	.	.	.	.	.	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	.	L	N	E
Query Conservation																																																							.	.	.	.	.	.	.																	.
Alig confidence																																																							.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		R	R	E	T	I	A	A	E	D	V	L	H	D	L	G	A	F	S	L	T	S	S	D	S	Q	A	M	G	R	V	G	E	V	I	L	R	T	W	Q	V	A	H	R	M	K	V	Q	R	G	A	L	A	E	E	T	G	D	N	D	N	F	R	V	K	R	Y	I	A	K	Y	T	I	N	P	A	L	T	H	G	I
Template Known Secondary structure															T	T	S	S							T	T	S	S	S		T	T																			S		T	T			S	S	S													T							T	T
Template Predicted Secondary structure
Template SS confidence
		1338	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.
		412	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	E	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	E	V	G
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		1418	.	1420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions