 |
Job Description | P77554 | Confidence | 99.40% | Date | Thu Jan 5 12:30:31 GMT 2012 |
Rank | 80 | Aligned Residues | 70 |
% Identity | 19% | Template | d1ejxc1 |
SCOP info | Composite domain of metallo-dependent hydrolases
| Composite domain of metallo-dependent hydrolases
| alpha-Subunit of urease
|
Resolution | 1.60 |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | T | M | K | I | T | D | P | H | Y | Y | L | D | N | V | L | L | E | T | G | F | D | Y | E | N | G | V | A | V | Q | T | R | T | A | R | Q | T | V | E | I | Q | D | G | K | I | V | A | L | R | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | H | P | D | A | T | L | P | H | Y | D | A | G | G | K | L | M | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   |   |
|   |
Template Sequence |   |
G | Q | M | L | A | A | D | C | V | D | L | V | L | T | N | A | L | I | V | D | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | G | I | V | K | A | D | I | G | V | K | D | G | R | I | F | A | I | G | K | A | G | N | P | D | I | Q | P | N | V | T | I | P | I | G | A | A | T | E | V | I | A | A | E | G | K | I | V | T |
Template Known Secondary structure |   |
|
|
|
| G | G | G | S |
| S |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |
| T | T | T |
| S | S |
|
|  |  |
|
| T | T |
|  |  |  |  |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1058 | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | T | R | D | M | H | I | H |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|   |
|
Template Sequence |   |
A | G | S | I | E | V | G | K | L |
Template Known Secondary structure |   |
 |
|
|
|
| T | T | S | B |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
1128 | . | 1130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|