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Job DescriptionP77554
Confidence97.35%DateThu Jan 5 12:30:31 GMT 2012
Rank137Aligned Residues246
% Identity13%Templatec3rcmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tatd family hydrolase; PDBTitle: crystal structure of efi target 500140:tatd family hydrolase from2 pseudomonas putida
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  TRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNL
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Template Sequence  LIDIGVNLTNSSFHDQQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AAIVERALEAGVTQXLLT. GTSLAVSEQAL
Template Known Secondary structure 
TT
GGGTT
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   3......10......... 20.........30....... ..40........
 
   197..200.........210.........220.........230.........240.........250.... .....260.........270
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Query Sequence  QNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAM. . . . . . EKSLDTMFQIALDYDK
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Template Sequence  ELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRL
Template Known Secondary structure 
TTSSS


GGGGGG

TTTSTTTTT
SS
T
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   4950.........60.........70.........80.........90.........100.........110.........120........
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  GVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQL
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Template Sequence  PVFLHERDASERLLAILKD. . . . . . . . . . . YRDHLTGAVVHCFTGEREALFAYLDLDLHIGITG. . WICDERRGTHLHPL
Template Known Secondary structure 
S
T...........TGGG
S

S



TT

G..GGG
TTT
GGG
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   129130.........140....... ..150.........160.........170.........180. ........190.....
 
   351.. ......360.........370... ......380.........390.........400.........410...
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Query Sequence  HDK. . GVKVMTGTDSVIDHWSPYGL. . . . . . . . . GDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKG
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Template Sequence  VGNIPEGRLXLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHR. . . . GESAEHTAAHTTATARDFFQLP
Template Known Secondary structure  TTS
TTS


TTS


TT
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TT



GGG....TS
TT

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   196...200.........210.........220.........230.........240... ......250.........260.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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