Job Description P77554 Confidence 99.68% Date Thu Jan 5 12:30:31 GMT 2012 Rank 65 Aligned Residues 297 % Identity 12% Template c3msrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolases; PDBTitle: the crystal structure of an amidohydrolase from mycoplasma synoviae Resolution 2.16 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	.	.	.	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G
Query Conservation																	.	.	.
Alig confidence													.				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	K	F	A	R	T	V	L	G	D	.	I	P	V	E	K	L	G	I	T	D	C	H	D	H	F	I	K	N	G	G	P	E	V	E	E	H	I	D	F	L	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	V	D	A	S	I	K	E	F	K	E	F	I	D	R	G
Template Known Secondary structure									T	T			.			G	G	G										S		B		S	S							G	G	G		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure													.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	.	.	.	.	.	.	.	.	.	.	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence		G	S	T	I	V	T	X	D	P	P	N	V	G	R	D	V	L	K	T	L	E	I	A	N	A	V	K	N	L	G	G	N	V	I	X	S	T	G	F	H	K	A	K	F	Y	D	K	Y	S	S	W	L	A	V	V	P	T	E	E	I	V	K	X	C	V	A	E	I	E	E	G	X	D	E	Y	N	Y	N	G	P
Template Known Secondary structure											T	T	T	T														G	G	G	T												G	G	G	S		T	T	T	S					S															T			B	T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
															243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.																					.
Template Conservation																																																								.	.	.	.	.																					.
Template Sequence		V	V	K	R	S	K	A	K	A	G	I	I	K	A	G	T	G	Y	G	A	I	D	R	L	E	L	K	A	L	E	V	A	A	R	T	S	I	L	T	G	C	P	I	L	V	H	T	Q	L	G	T	X	A	L	.	.	.	.	.	E	V	A	K	H	L	I	G	F	G	A	N	P	D	K	I	Q	I	S	H	.
Template Known Secondary structure					B		S											B	T	T	B																												G	G	G		S			.	.	.	.	.										T			G	G	G						.
Template Predicted Secondary structure																																																								.	.	.	.	.																					.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.											.	.	.	.	370	.	.	.	.
Predicted Secondary structure																							.	.	.																										.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																										.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	.	.	.	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	V	.	.	K	V	M	T	G	T	D	S	V	I	.	.	.	.	.	.	.	.	.	.	D	H	W	S	P	Y	G	L	G
Query Conservation																							.	.	.																										.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																										.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	K	N	P	D	K	Y	Y	Y	E	K	V	I	K	E	T	G	V	T	L	C	F	D	G	P	D	R	V	K	Y	Y	P	D	S	L	L	A	E	N	I	K	Y	L	V	D	K	G	L	Q	K	H	I	T	L	S	L	D	A	G	R	I	L	Y	Q	R	N	Y	G	L	T	K	G	K	Q	T	F	G	L	A
Template Known Secondary structure		G	G	G	S																						T	T		T	T	T																T	T		G	G	G									S	G	G	G	S							T	T						T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E	R	V	W	P	K	A	Q	D	D	A	S	F	V	L
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		Y	L	F	D	R	F	L	P	L	L	K	Q	V	G	.	.	.	.	V	S	K	E	A	I	F	D	I	L	V	N	N	P	K	R	V	L	A	F	D	E	K	R	N	F	D	P	L	K	V	S	K	E	V	L
Template Known Secondary structure						T									T	.	.	.	.											T							T	S									G	G	G	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions