Job Description P77554 Confidence 96.12% Date Thu Jan 5 12:30:31 GMT 2012 Rank 143 Aligned Residues 275 % Identity 12% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		I	I	D	F	R	L	R	P	.	.	.	.	.	P	A	M	G	F	L	N	A	R	I	Y	T	R	P	D	I	R	N	R	F	T	R	Q	L	G	F	E	P	A	P	S	A	E	E	K	S	L	E	L	M	F	E	E	M	A	A	A	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	N
Template Known Secondary structure					S	S	B			.	.	.	.	.	S	S	T	T	G	G	G	S																	T									T	T													T												T	T	T
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	.	.	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I
Query Conservation																																																											.	.
Alig confidence																									.	.	.																																.	.
Template Conservation																									.	.	.
Template Sequence		A	D	V	A	A	V	A	K	A	Y	P	D	K	F	H	P	V	G	S	I	E	A	A	.	.	.	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L	G	I	R	I	V	N	L	E	P	G	V	W	A	T	P	M	H	V	D	D	R	R	L	Y	P	L	Y	A	F	C	E	D	N	G	I	P	V	I	M
Template Known Secondary structure											S	T	T	T										S	.	.	.	S														T	T								G	G	G	S	S	S				T	T		G	G	G										T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	.
Query Conservation																																																																																	.
Alig confidence																																				.	.	.																																											.
Template Conservation																																				.	.	.
Template Sequence		M	T	G	G	N	A	G	P	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	D	F	P	D	L	T	V	V	S	S	H	.	.	.	G	N	W	P	W	V	Q	E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	G	H	A	D	F	I	Q	A	A	N	S	F
Template Known Secondary structure				S	S	S		S	S	S	G	G	G	G													T	T							G	.	.	.	G	G	T	T													T	T						G	G	G	G	S	S	S	T	T									T	T	T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E	R
Query Conservation		.
Alig confidence		.													.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		L	A	D	R	M	L	F	G	T	A	Y	P	M	.	.	.	.	.	.	.	.	C	P	L	K	E	Y	T	E	W	F	L	T	L	.	.	.	.	.	P	I	K	P	D	A	M	E	K	I	L	H	G	N	A	E	R	L	L	A	Q	A	G	R
Template Known Secondary structure		T	T	T	T	B						B	T	S	.	.	.	.	.	.	.	.	S											T	S	.	.	.	.	.												T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions