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Job DescriptionP77554
Confidence94.25%DateThu Jan 5 12:30:31 GMT 2012
Rank150Aligned Residues274
% Identity12%Templatec3ij6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  RDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNL.
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Template Sequence  IDAYAHILP. . . . . . . . . . . AKYYQKMLSVEPNIPNMFPFIKIKTLMDLDERLTKWPDQNTKQVISLANISPEDFTDSKT
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TT
GGGG

T
S
TT
S

GGGTS
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   5....10... ......20.........30.........40.........50.........60.........70...
 
   197..200.........210.........220.........230....... ..240.........250.........260......
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Query Sequence  . . . . . . . . . QNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQA. GAHYVGGLDPTSVDGAMEKSLDTMFQIAL
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Template Sequence  SAELCQSANEELSNLVDQHPGKFAGAVAILPMNN. . IESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAA
Template Known Secondary structure 
TTT

TT
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TTSTTTTSTTT
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   74.....80.........90.........100....... ..110.........120.........130.........140.........150.
 
   267..270.........280.. .......290.........300.........310......... 320.........330...
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Query Sequence  DYDKGVDIHLHETTPA. . . . . . . . . . . . GVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQ. VDELANRMVVQQIS
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Template Sequence  KLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQDYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKK
Template Known Secondary structure  TT





TTSSS

TTTTT
TT

SGGGTTTTTSS
GGG
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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   334.....340.........350... ......360.........370.........380.........390.........400.........410.
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Query Sequence  IASTVPIGTLHMPLKQLHDK. . GVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNE
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Template Sequence  FYVDTAILGNTPALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIITQAIN. . . . . . . . DLTISDKDKQKIFHDNYYSLIK
Template Known Secondary structure 


SSS

GGG



BTSSSTTT
S........TSSS
T
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   232.......240.........250.........260.........270.........280. ........290.........300...
 
   412
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Query Sequence  K
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Template Conservation   
Template Sequence  E
Template Known Secondary structure 
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   304
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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