Job Description P77554 Confidence 100.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 40 Aligned Residues 372 % Identity 15% Template c3griB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: the crystal structure of a dihydroorotase from staphylococcus aureus Resolution 2.00 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																								.
Template Conservation												.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		L	I	K	N	G	K	V	L	Q	N	.	.	.	.	.	.	.	.	.	.	G	E	L	Q	Q	A	D	I	L	I	D	G	K	V	I	K	Q	I	A	P	A	I	E	.	P	S	N	G	V	D	I	I	D	A	K	G	H	F	V	S	P	G	F	V	D	V	H	V	H	L	R	E	P	G	G	E	Y	K	E	T
Template Known Secondary structure											T	.	.	.	.	.	.	.	.	.	.	T											T	T							T	T			.			T	T							T	T																T	T	T		T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	T	G	T	K	A	A	A	R	G	G	F	T	T	V	C	P	X	P	N	T	R	P	V	P	D	S	V	E	H	F	E	A	L	Q	K	L	I	D	D	N	A	Q	V	R	V	L	P	Y	A	S	I	T	T	R	Q	L	G	K	E	L	V	D	F	P	A	L	V	K	E	G	A	F	A	F	T	D	D	G
Template Known Secondary structure												T	T								S		S	S	S		S		S																S	S								S	B	G	G	G		S	S	S	B								T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		V	G	V	Q	T	.	.	.	.	A	S	X	X	Y	E	G	X	I	E	A	A	K	V	N	K	A	I	V	A	H	C	E	D	N	S	L	I	Y	G	G	A	X	H	E	G	K	R	S	K	E	L	G	I	P	G	I	P	N	I	C	E	S	V	Q	I	A	R	D	V	L	L	A	E	A	A	G	C	H	Y	H
Template Known Secondary structure		S				S	.	.	.	.														T	T										G	G	G		T	T		S			S	S							T						T																		T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		152	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		V	C	H	V	S	T	.	.	.	.	.	.	.	.	K	E	S	V	R	V	I	R	D	A	K	R	A	G	I	H	V	T	A	E	V	T	P	H	H	L	L	L	T	E	D	D	I	P	G	N	N	A	I	Y	K	X	N	P	.	.	.	.	.	P	L	R	S	T	E	D	R	E	A	L	L	E	G	L	L	D
Template Known Secondary structure				S				.	.	.	.	.	.	.	.													T	T																G	G	G			S	S		G	G	G			S	S	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		354	.	.	.	.	.	360	.	.										.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		G	V	K	V	M	T	G	T	D	.	.	.	.	.	.	.	.	.	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E	R	V	W	P	K	A	Q	D	D	A
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																																																																						.
Template Sequence		G	T	I	D	C	I	A	T	D	H	A	P	H	A	R	D	E	K	A	Q	P	X	E	K	A	P	F	G	I	V	G	S	E	T	A	F	P	L	L	Y	T	H	F	V	K	N	G	D	W	T	L	Q	Q	L	V	D	Y	L	T	I	K	P	C	E	T	F	N	L	.	E	Y	G	T	L	K	E	N	G	Y	A
Template Known Secondary structure		T	S	S							B									S	S		T	T	T	S							T	T	T										T	T	S	S	S											T								T		.	S		S				T	T	S	B
Template Predicted Secondary structure																																																																						.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.
		425	.	.	.	.	430	.	.	.																	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	V	L	V	D	A	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	A	V	A	R	I	S	P	R	T	A	T	F	H	K	G	Q	L	V	W
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	T	I	I	D	L	D	S	E	Q	E	I	K	G	E	D	F	L	S	K	A	D	N	T	P	F	I	G	Y	K	V	Y	G	N	P	I	L	T	X	V	E	G	E	V	K	F
Template Known Secondary structure								S	S							G	G	G			S	S					T	T	T	T				S									T	T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420