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Job DescriptionP77554
Confidence100.00%DateThu Jan 5 12:30:31 GMT 2012
Rank36Aligned Residues367
% Identity17%Templatec3feqB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative amidohydrolase; PDBTitle: crystal structure of uncharacterized protein eah89906
Resolution2.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  YYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPW
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Template Sequence  TVLQGGNVLDL. . . . . . . ERGVLLEHHHVVIDGERIVEVTDRPVDLP. NAQAIDVRGKTVMPGFIDCHVHVLASNANLGV
Template Known Secondary structure  T.......TTTTT
S



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   4.....10.... .....20.........30.........40... ......50.........60.........70.....
 
   134.....140.........150.........160. ........170.........180.........190.........200........
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Query Sequence  RSLNRPAGTTIQDMIKLEQKMLPELQPY. . . . . TQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQA
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Template Sequence  NATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADWSLMQAVETGLVSGPRIFPSGKALSQTGGHGDFR. . . . . PRLEPC
Template Known Secondary structure  S
TTSSS

TTSS
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   76...80.........90.........100.........110.........120.........130.........140.... .....150
 
   209210.........220.........230.........240..... ....250.........260.........270.........
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Query Sequence  GFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGL. . . . . . . . . DPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHET
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Template Sequence  SCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTG
Template Known Secondary structure 

S

TT
S

STT
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B

SSSSS

TTSB
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TT

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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   280.........290.........300.........310... ......320.........330.........340..
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Query Sequence  TPAGVAAINYMVETVEKTPQLKGKLTISHAFALA. . . . . . . . . . . . . . TLNEQQVDELANRMVVQQISIASTVPIGT. . .
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Template Sequence  RAIARAVRC. . . . . . . . . . . . . GVRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVASVQQ
Template Known Secondary structure  .............T
S

T


TSTGGGT

TT
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   234.....240.. .......250.........260.........270.........280.........290.........300
 
   343......350.........360.........370.........380.........390.........400........ .410.........420
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Query Sequence  . LHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLP. LNEKGERVWPKA
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Template Sequence  KGRESLEIYANAGVKMGFGSDLLGEMHAFQSGEFRIRAEVL. . . . . . . . . . . GNLEALRSATTVAAEIVNMQGQLGVIAV
Template Known Secondary structure  T

B






GGGGGGGG...........TTTT
BTTBSS
ST
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   301........310.........320.........330.........340. ........350.........360.........
 
   421........430......... 440.........450.......
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Query Sequence  QDDASFVLVDASCSAEAVA. . . RISPRTATFHKGQLVWGS
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Template Sequence  GAIADLVVLDGNPLEDIGVVADEGARVEYVLQRGTLVKRQ
Template Known Secondary structure  TSB

SS
TTT
GGGTSSSSSSTT
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   370.........380.........390.........400.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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