Job Description P77554 Confidence 100.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 26 Aligned Residues 378 % Identity 13% Template c3dc8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydropyrimidinase; PDBTitle: crystal structure of dihydropyrimidinase from sinorhizobium meliloti Resolution 1.85 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		T	V	I	K	G	G	T	I	V	T	A	.	.	.	.	.	.	.	.	.	.	D	L	T	Y	K	A	D	V	K	V	E	G	G	R	I	V	E	I	G	P	N	.	.	.	.	L	S	G	A	E	T	L	D	A	T	G	C	Y	V	M	P	G	G	I	D	P	H	T	H	L	E	M	P	F	M	G	T	Y	S
Template Known Secondary structure						S						S	.	.	.	.	.	.	.	.	.	.	S											T	T							S	S	.	.	.	.				S						T	T														T	T				T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		S	D	D	F	E	S	G	T	R	A	A	L	A	G	G	T	T	M	V	V	D	F	A	L	P	S	G	Q	S	L	L	E	A	L	T	M	W	D	N	K	S	T	R	A	N	C	D	Y	S	F	H	M	A	I	T	W	W	G	.	E	Q	V	F	N	E	M	E	T	I	V	K	D	K	G	I	N	T	F	H	F
Template Known Secondary structure		S													T	T																										T	T	T		S	S										S		S	.														S				B			B
Template Predicted Secondary structure																																																												.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																									.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	Y	K	G	A	L	M	V	D	D	D	E	M	F	S	S	F	Q	R	C	A	A	L	G	A	L	P	L	V	H	A	E	N	G	D	V	V	A	Q	L	Q	A	K	L	L	A	E	G	N	S	G	P	E	A	H	A	Y	S	R	P	A	E	V	E	G	E	A	A	N	R	A	I	M	I	A	D	M	A	G
Template Known Secondary structure		S		S	T	T	T	T	B																	T		B				B		S															T	T			S							T	S																				T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q
Query Conservation
Alig confidence														.	.	.	.	.																							.	.																									.	.
Template Conservation														.	.	.	.	.																							.	.																									.	.
Template Sequence		C	P	V	Y	I	V	H	T	S	C	E	Q	.	.	.	.	.	A	H	E	A	I	R	R	A	R	A	K	G	M	R	V	F	G	E	P	L	I	Q	.	.	H	L	T	L	D	E	T	E	Y	F	D	K	D	W	D	H	A	A	R	R	V	M	S	P	.	.	P	F	R	N	K	L	H	Q	D	S	L	W	A
Template Known Secondary structure							S	S			S			.	.	.	.	.											T	T								B			.	.						G	G	G	G	G		S	S							T			S	S	.	.					G	G	G
Template Predicted Secondary structure														.	.	.	.	.																							.	.																									.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.													.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query Sequence		L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	.	.	.	.	.	.	.	.	.	.	.	.	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	.	L	N	E	K	G	E	R	V
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																																									.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		G	L	A	S	G	S	L	Q	V	V	A	T	D	H	C	A	F	T	T	E	Q	K	R	F	G	V	G	D	F	T	R	I	P	N	G	T	G	G	L	E	D	R	M	P	M	L	W	T	Y	G	V	A	T	G	R	I	T	M	N	E	F	V	A	V	T	S	T	N	I	A	K	I	L	N	I	Y	P	K	K	G
Template Known Secondary structure						T	S	S				B			B									G	G	G	T	T		G	G	G	S							T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.																	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	K	A	Q	D	D	A	S	F	V	L	V	D	A	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	A	V	A	R	I	S	P	R	T	A	T	F	H	K	G	Q	L	V	W
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	L	V	G	A	D	A	D	L	V	V	W	D	P	K	R	S	K	T	I	S	A	K	T	Q	Q	S	A	I	D	Y	N	V	F	E	G	K	T	V	T	G	L	P	R	F	T	L	T	R	G	V	V	S	I
Template Known Secondary structure				S	T	T	S	B																G	G	G		S	S	S	S	S			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.