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Job DescriptionP77554
Confidence100.00%DateThu Jan 5 12:30:31 GMT 2012
Rank19Aligned Residues364
% Identity12%Templatec3be7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110.........120.........130.
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Query Sequence  PHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGG
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Template Sequence  EDFLIKSKGYLDI. . . . . . . . QTGEIIKADLLIRNGKIAEIGKI. . . NTKDATVISIPDLILIPGLMDSHVHIVGNDSKG
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S
T........TT



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   4.....10...... ...20.........30......... 40.........50.........60.........70..
 
   132.......140.........150....... ..160.........170.........180.........190.........200...
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Query Sequence  PWRSLNRPAGTTIQDMIKLEQKMLPE. . . . . . . . LQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVL
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Template Sequence  EESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALGITGGHCD. . . . . . . .
Template Known Secondary structure  GGGTT

TTTT


STTTTSS





S
BB
TTSTTS........
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   73......80.........90.........100.........110.........120.........130.........140....
 
   204.....210.........220.........230.........240..... ....250.........260.........270....
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Query Sequence  ARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGL. . . . . . . . . DPTSVDGAMEKSLDTMFQIALDYDKGVDI
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Template Sequence  . . HNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAA
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S
TTT



TTB

ST
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B

SSSSS

TTSB
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   145....150.........160.........170.........180.........190.........200.........210.........220..
 
   275....280....... ..290.........300.........310.........320.........330.........340.
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Query Sequence  HLHETTPAGVAAI. . . . . . . . . . . . . NYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIG
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Template Sequence  HAHGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNN. . . . . . . . TVLSMDIFVSDYILGEGAKAGIREESLNKERLVGK
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ST
S
TT

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STTTT

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   223......230.........240.........250......... 260.........270.........280.........290....
 
   342.......350.........360.........370.........380.........390.........400.........410.........420.
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Query Sequence  TLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQ
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Template Sequence  KQRENFMNAHRRGAIITFGTDA. . . . . GIFDHGDNAKQFAYMVE. . . . . WGMTPLEAIQASTIKTATLFGIENIGQIKEG
Template Known Secondary structure  T





B.....TTB
TTGGGG.....TT

TTTT

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TT
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   295....300.........310...... ...320.........330... ......340.........350.........360....
 
   422.......430.........440.........450.....
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Query Sequence  DDASFVLVDASCSAEAVARISPRTATFHKGQLVW
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Template Sequence  FDADIVGVIENPLA. NIRTLEEVAFVMKEGKVYK
Template Known Secondary structure  SB

SS
TTT.
GGGTTS

TT
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   365....370........ .380.........390.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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