Job Description P77554 Confidence 100.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 48 Aligned Residues 373 % Identity 14% Template c2z00A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of dihydroorotase from thermus thermophilus Resolution 2.42 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.			.																				.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.			.																				.	.	.	.	.
Template Sequence		X	I	L	I	R	N	V	R	L	V	D	A	.	.	.	.	.	.	.	.	R	G	.	E	R	G	P	A	D	V	L	I	G	E	G	R	I	L	S	L	E	G	.	.	.	.	.	G	E	A	K	Q	V	V	D	G	T	G	C	F	L	A	P	G	F	L	D	L	H	A	H	L	R	E	P	G	E	E	V	K
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	T		.											T	T					S	B		.	.	.	.	.				S						T	T																T	T	T		T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.			.																				.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.									.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	L	F	S	G	L	L	A	A	V	R	G	G	Y	T	D	L	V	S	X	P	N	T	K	P	P	V	D	T	P	E	A	V	R	A	L	K	E	K	A	K	A	L	G	L	A	R	L	H	P	A	A	A	L	T	E	K	Q	E	G	K	T	L	T	P	A	G	L	L	R	E	A	G	A	V	L	L	T	D
Template Known Secondary structure														T	T								S		S	S	S		S		S															T	S	S								S	B	G	G	G		S	S	S	B										T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																										.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	S	L	D	T	M	F	Q	I	A	L	D
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		D	G	R	T	N	E	D	.	.	.	.	A	G	V	L	A	A	G	L	L	X	A	A	P	L	G	L	P	V	A	V	H	A	E	D	A	G	L	R	R	N	G	V	X	N	D	G	P	L	A	D	L	L	G	L	P	G	N	P	P	E	A	E	A	A	R	I	A	R	D	L	E	V	L	R	Y	A	L	R	R
Template Known Secondary structure		T	T	S					.	.	.	.												G	G	G	T														T	T		S				S							T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L
Query Conservation
Alig confidence																.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		S	P	A	T	P	R	L	H	V	Q	H	L	S	T	.	.	.	.	.	.	K	R	G	L	E	L	V	R	E	A	K	R	A	G	L	P	V	T	A	E	A	T	P	H	H	L	T	L	T	E	E	A	L	R	T	F	D	P	L	F	K	V	A	P	.	.	.	.	.	P	L	R	G	E	E	D	R	E	A	L
Template Known Secondary structure			S	S							T	T				.	.	.	.	.	.													T	T																G	G	G	G	G	G			G	G	G			S	S	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.										.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	.	.	.	.	.	.	.	.	.	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E	R	V	W	P
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																																																				.
Template Conservation																																																																														.
Template Sequence		L	E	G	L	L	D	G	T	L	D	A	I	A	T	D	H	A	P	H	T	L	A	E	K	E	K	D	L	L	R	A	P	F	G	I	P	S	L	E	V	A	F	P	L	L	Y	T	E	L	H	L	K	R	G	F	P	L	Q	R	L	V	E	L	F	T	D	G	P	R	R	V	L	G	L	P	P	.	L	H	L
Template Known Secondary structure								T	S	S							B					T	T	G	G	G	S		T	T	T	S				B			T	T	T									T																T								T				.			S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.																.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	Q	D	D	A	S	F	V	L	V	D	A	S	C	S	A	E	A	V	A	R	I	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	A	T	F	H	K	G	Q	L	V	W
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	G	A	E	A	S	L	V	L	L	S	P	K	E	R	P	V	D	P	S	A	F	A	S	K	A	R	Y	S	P	W	A	G	W	V	L	G	G	W	P	V	L	T	L	V	A	G	R	I	V	H
Template Known Secondary structure		S	T	T	S	B															G	G	G		S	S	S					T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.