Job Description P77554 Confidence 100.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 29 Aligned Residues 366 % Identity 13% Template c2qs8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:xaa-pro dipeptidase; PDBTitle: crystal structure of a xaa-pro dipeptidase with bound2 methionine in the active site Resolution 2.33 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	Y	Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		S	K	T	L	I	H	A	G	K	L	I	D	G	.	.	.	.	.	.	.	K	S	D	Q	V	Q	S	R	I	S	I	V	I	D	G	N	I	I	S	D	I	K	K	G	F	I	S	S	N	D	F	E	D	Y	I	D	L	R	D	H	T	V	L	P	G	L	X	D	X	H	V	H	F	G	Q	E	Y	Q	S	K
Template Known Secondary structure														S	.	.	.	.	.	.	.	S		S	S											T	T								S					T	T	S	S																					T	T						T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	.	.	.	.	.	.	.	.	.	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		A	Q	A	P	I	K	V	E	R	E	X	Q	A	I	L	A	T	Q	H	A	Y	V	T	F	K	S	G	F	T	T	V	R	Q	V	G	D	S	G	L	V	A	I	S	L	R	D	A	I	N	S	G	K	L	A	G	P	R	I	F	A	A	G	K	T	I	A	T	T	G	G	H	A	D	P	.	.	.	.	.	.
Template Known Secondary structure		T	T	S		S																					T	T										S	S	S											T	T	S	S										S		B			T	T		T	T		T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.
Query Sequence		L	A	R	R	Q	A	G	F	E	C	E	I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	.	.	.	.	.	.	.	.	.	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D
Query Conservation																																													.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	G	K	A	V	D	D	Y	D	Y	P	V	P	E	Q	G	V	V	N	G	P	Y	E	V	Y	A	A	V	R	Q	R	Y	K	D	G	A	D	G	I	K	I	T	V	T	G	G	V	L	S	V	A	K	S	G	Q	N	P	Q	F	T	Q	E	E	V	D	A	V	V	S	A	A	K	D	Y	G	X	W	V	A
Template Known Secondary structure		T	T	T			G	G	G						G	G	G	T				S															T		S							B			S	S	S	S	S	S		S	S		B		S															T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																							.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	A	H	G	A	E	G	X	K	R	A	I	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	D	S	I	E	H	G	T	F	X	D	L	E	A	X	D	L	X	I	E	N	G	T	Y	Y	V	P	T	I	S	A	G	E	F	V	A	E	K	S	K	I	D	N	F	F	P	E	I
Template Known Secondary structure						S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S						T	T													T																	T	T	S	T	T	S	S		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.																	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	.	L	N
Query Conservation																																																																															.
Alig confidence																																		.	.	.	.	.																			.	.	.	.	.																		.
Template Conservation																																		.	.	.	.	.																			.	.	.	.	.
Template Sequence		V	R	P	K	A	A	S	V	G	P	Q	I	S	D	T	F	R	K	A	Y	E	K	G	V	K	I	A	F	G	T	D	A	.	.	.	.	.	G	V	Q	K	H	G	T	N	W	K	E	F	V	Y	X	V	E	N	.	.	.	.	.	G	X	P	A	X	K	A	I	Q	S	A	T	X	E	T	A	K	L	L	R
Template Known Secondary structure		T																						T			B						B	.	.	.	.	.	T	T	B		T	T		T	T									T	.	.	.	.	.	T										T	T							T	T
Template Predicted Secondary structure																																		.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	E	R	V	W	P	K	A	Q	D	D	A	S	F	V	L	V	D	A	S	C	S	A	E	A	V	A	R	I	S	P	R	T	A	T	F	H	K	G	Q	L	V	W	G	S	V
Query Conservation
Alig confidence																												.																.
Template Conservation																												.																.
Template Sequence		I	E	D	K	L	G	S	I	E	S	G	K	L	A	D	L	I	A	V	K	G	N	P	I	E	D	.	I	S	V	L	E	N	V	D	V	V	I	K	D	G	L	.	L	Y	E	G	M
Template Known Secondary structure			T	T	T	S	S	S			T	T	S	B							S	S		T	T	T		.	G	G	G	G	G	G							T	T		.
Template Predicted Secondary structure																												.																.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.