Job Description P77554 Confidence 72.26% Date Thu Jan 5 12:30:31 GMT 2012 Rank 164 Aligned Residues 156 % Identity 6% Template c2qpxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:predicted metal-dependent hydrolase of the tim-barrel fold; PDBTitle: crystal structure of putative metal-dependent hydrolase (yp_805737.1)2 from lactobacillus casei atcc 334 at 1.40 a resolution Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	.	.	.	I	N	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I
Query Conservation																															.	.	.
Alig confidence																															.	.	.																							.	.
Template Conservation																																																								.	.
Template Sequence		L	Y	H	V	A	P	F	I	I	A	Q	D	X	P	L	Q	F	H	V	G	Y	G	D	A	D	T	D	X	Y	L	G	N	P	L	L	X	R	D	Y	L	K	A	F	T	K	K	G	L	K	V	V	L	L	H	.	.	C	Y	P	Y	H	R	E	A	G	Y	L	A	S	V	F	P	N	L	Y	F	D	I	S	L
Template Known Secondary structure													T								S				T	T	S		G	G	G			G	G	G	G								G	G	G	T								.	.		T	T												S	T	T						T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410
Predicted Secondary structure																						.	.																	.																																		.
Query SS confidence																						.	.																	.																																		.
Query Sequence		A	S	T	V	P	I	G	T	L	H	M	P	L	K	Q	L	H	D	K	G	.	.	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	.	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	.	G	D	V	L	P	L	N
Query Conservation																						.	.																	.																																		.
Alig confidence																						.	.																	.																																		.
Template Conservation
Template Sequence		L	D	N	L	G	P	S	G	A	S	R	V	F	N	E	A	V	E	L	A	P	Y	T	R	I	L	F	A	S	D	A	S	T	Y	P	E	X	Y	G	L	A	A	R	Q	F	K	Q	A	L	V	A	H	F	N	Q	L	P	F	V	D	L	A	Q	K	K	A	W	I	N	A	I	C	W	Q	T	S	A	K	L	Y
Template Known Secondary structure						S	G	G	G									T	S	S	S		G	G	G									B	S																					T		S	S															T							T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		411	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q	E	R	E
Template Known Secondary structure		T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions