Job Description P77554 Confidence 100.00% Date Thu Jan 5 12:30:31 GMT 2012 Rank 31 Aligned Residues 357 % Identity 15% Template c2p9bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:possible prolidase; PDBTitle: crystal structure of putative prolidase from2 bifidobacterium longum Resolution 1.70 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.														.
Query SS confidence																																			.														.
Query Sequence		P	H	Y	Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	.	Q	D	G	K	I	V	A	L	R	E	N	K	L	.	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y
Query Conservation																																			.														.
Alig confidence																	.	.	.	.	.	.													.														.																															.	.
Template Conservation																	.	.	.	.	.	.																																																										.	.
Template Sequence		E	P	F	A	L	A	H	A	T	I	V	T	G	D	K	.	.	.	.	.	.	A	G	T	I	L	R	N	X	T	I	V	V	G	A	D	G	R	I	E	Q	V	A	P	S	I	E	T	S	I	P	A	E	Y	H	Y	L	D	G	T	G	K	I	V	X	P	G	L	I	N	A	H	T	H	L	F	S	Y	.	.
Template Known Secondary structure																T	.	.	.	.	.	.	T													T	T	S	B							G	G	G					T	T							T	T														S				.	.
Template Predicted Secondary structure																	.	.	.	.	.	.																																																										.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	W	R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	A	A	T	V	K	H	N	A	T	T	L	L	E	S	G	V	T	T	I	R	T	L	G	D	V	G	Y	E	V	V	T	L	R	D	Q	I	D	A	G	Q	I	L	G	P	R	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T							S			S	S	S											T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		210	.	.	.	.	.	.	.	.	.	220	.										.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		F	E	C	E	I	V	A	F	P	Q	H	G	.	.	.	.	.	.	.	.	.	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	.	.	.	.	.	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H
Query Conservation														.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		A	S	G	P	L	X	A	I	P	E	G	H	G	A	P	L	I	A	L	T	S	G	T	P	E	E	A	R	T	A	V	A	Q	N	L	K	A	G	V	N	A	I	K	I	A	A	T	G	G	V	T	D	A	Q	E	I	Q	X	S	V	E	Q	X	R	A	I	C	D	E	A	H	Q	Y	G	V	I	V	G	A	H
Template Known Secondary structure					S							S	S									S																T	T		S							S			T	T	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		276	.	.	.	280	.	.	.	.	.	.	.	.	.														290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	E	T	T	P	A	G	V	A	A	I	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		A	Q	.	S	P	E	G	V	R	R	S	L	L	A	G	V	D	T	I	E	H	G	S	V	L	D	D	E	L	I	G	X	F	R	H	N	P	N	A	L	R	G	Y	S	A	L	I	P	T	L	S	A	G	L	P	L	T	L	L	G	Q	D	V	T	G	I	T	D	I	Q	L	E	N	S	K	N	V	V	G	G
Template Known Secondary structure				.	S											T		S																				T	T	S	T	T	S																	S
Template Predicted Secondary structure				.
Template SS confidence
		247	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	H	M	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	.	L	N	E	K	G	E	R	V	W	P	K	A	Q
Query Conservation																																																																				.
Alig confidence																														.	.	.																.	.	.	.																	.
Template Conservation																														.	.	.																.	.	.	.
Template Sequence		X	V	S	G	A	R	Q	A	H	E	A	G	L	X	I	G	V	G	T	D	T	G	X	T	F	V	P	Q	.	.	.	Y	A	T	W	R	E	L	E	L	L	V	A	Y	A	G	.	.	.	.	F	S	P	A	E	A	L	H	A	A	T	A	V	N	A	S	I	L	G	V	D	A	E	T	G	S	L	E	V	G
Template Known Secondary structure												T	T			B						T	T	S	T	T	S		T	.	.	.	T															.	.	.	.											T							T	T		T	T	T	S	S	S			T	T
Template Predicted Secondary structure																														.	.	.																.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	S	F	V	L	V	D	A	S	C	S	A	E	A	V	A	R	I	S	P	R	T	A	T	F	H	K	G	Q	L	V	W	G	S
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		K	S	A	D	L	L	V	L	N	A	N	P	L	D	.	D	L	R	A	L	E	H	P	A	L	V	I	A	A	G	H	P	V	W	R	P
Template Known Secondary structure		S	B							S	S		T	T	T	.		G	G	G	G	T	S		S					T	T					S
Template Predicted Secondary structure																.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low