Job Description P77554 Confidence 99.97% Date Thu Jan 5 12:30:31 GMT 2012 Rank 52 Aligned Residues 336 % Identity 15% Template c2imrA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dr_0824; PDBTitle: crystal structure of amidohydrolase dr_0824 from2 deinococcus radiodurans Resolution 1.78 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	.	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W	R	S	L
Query Conservation																																												.
Alig confidence									.	.	.	.	.																															.
Template Conservation									.	.	.	.	.
Template Sequence		T	P	R	L	L	T	C	.	.	.	.	.	D	V	L	Y	T	G	A	Q	S	P	G	G	V	V	V	V	G	E	T	V	A	A	A	G	H	P	D	E	L	R	R	Q	Y	P	H	A	A	E	E	R	A	G	A	V	I	A	P	P	P	V	N	A	H	T	H	L	D	M	S	A	Y	E	F	Q	A	L	P	Y
Template Known Secondary structure									.	.	.	.	.	S								S	S							T	T																T	T								S			S	S									S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E	I	V	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		F	Q	W	I	P	E	V	V	I	R	G	R	H	L	.	.	.	.	.	.	.	.	.	.	R	G	V	A	A	A	Q	A	G	A	D	T	L	T	R	L	G	A	G	G	V	G	D	I	V	W	.	.	.	.	.	.	.	.	A	P	E	V	M	D	A	L	L	A	R	E	D	L	S	G	T	L	Y	F	E	V
Template Known Secondary structure				T	S								T	T		.	.	.	.	.	.	.	.	.	.																T	T										.	.	.	.	.	.	.	.	S									T		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																																						.	.	.
Query SS confidence																					.	.	.	.	.																																																						.	.	.
Query Sequence		F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	.	.	.	.	.	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	.	.	.
Query Conservation																					.	.	.	.	.																																																						.	.	.
Alig confidence																					.	.	.	.	.																																																						.	.	.
Template Conservation
Template Sequence		L	N	P	F	P	D	K	A	D	E	V	F	A	A	A	R	T	H	L	E	R	W	R	R	L	E	R	P	G	L	R	L	G	L	S	P	H	T	P	F	T	V	S	H	R	L	M	R	L	L	S	D	Y	A	A	G	E	G	L	P	L	Q	I	H	V	A	E	H	P	T	E	L	E	M	F	R	T	G	G	G
Template Known Secondary structure			B			G	G	G																	T	T		B	T	T										S	S	S	B																T			B					S		S										S		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
																													289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	V	E	T	V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																																						.	.	.
Template Sequence		P	L	W	D	N	R	M	P	A	L	Y	P	H	T	L	A	E	V	I	G	R	E	P	G	P	D	L	T	P	V	R	Y	L	D	E	L	G	V	L	A	A	R	P	T	L	V	H	M	V	N	V	T	.	.	.	P	D	D	I	A	R	V	A	R	A	G	C	A	V	V	T	C	P	R	S	N	H	H	L	E
Template Known Secondary structure		T	T	G	G	G	S		G	G	G	S		S	S						T	S				T	T											T		G	G	G									S			.	.	.											T													T	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		T	L	H	M	P	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G	L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	.	.	.	G	E	R	V	W	P
Query Conservation																																																																									.	.	.
Alig confidence																														.	.	.	.														.	.	.																								.	.	.
Template Conservation																														.	.	.	.														.	.	.
Template Sequence		C	G	T	F	D	W	P	A	F	A	A	A	G	V	E	V	A	L	G	T	D	S	V	A	S	G	E	T	.	.	.	.	L	N	V	R	E	E	V	T	F	A	R	Q	L	.	.	.	Y	P	G	L	D	P	R	V	L	V	R	A	A	V	K	G	G	Q	R	V	V	G	T	P	F	L	R	R	G	E	T	W
Template Known Secondary structure													T	T														S		.	.	.	.	S		T											.	.	.		T	T	S																							S	T	T	S	B
Template Predicted Secondary structure																														.	.	.	.														.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		419	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	D	D	A	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	G	F	R	W	E	L
Template Known Secondary structure			G	G	G	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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