Job Description P77554 Confidence 99.95% Date Thu Jan 5 12:30:31 GMT 2012 Rank 57 Aligned Residues 362 % Identity 13% Template c1o12B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: crystal structure of n-acetylglucosamine-6-phosphate2 deacetylase (tm0814) from thermotoga maritima at 2.5 a3 resolution Resolution 2.50 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	D	N	V	L	L	E	T	G	F	D	Y	E	N	G	V	A	V	Q	T	R	T	A	R	Q	T	V	E	I	Q	D	G	K	I	V	A	L	R	E	N	K	L	H	P	D	A	T	L	P	H	Y	D	A	G	G	K	L	M	L	P	T	T	R	D	M	H	I	H	L	D	K	T	F	Y	G	G	P	W
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		X	I	V	E	K	V	L	I	V	D	.	.	.	.	.	.	.	.	.	P	I	D	G	E	F	T	G	D	V	E	I	E	E	G	K	I	V	K	V	E	K	R	.	.	.	.	.	.	.	.	.	.	E	C	I	P	R	G	V	L	X	P	G	F	V	D	P	H	I	H	G	V	V	G	A	D	T	X	N	C
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	T	T	T											T	T									.	.	.	.	.	.	.	.	.	.		S			S	S															T	T			T	T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10										.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	N	R	P	A	G	T	T	I	Q	D	M	I	K	L	E	Q	K	M	L	P	E	L	Q	P	Y	T	Q	E	R	A	E	K	L	I	D	L	L	Q	S	K	G	T	T	I	A	R	S	H	C	N	I	E	P	V	S	G	L	K	N	L	Q	N	L	Q	A	V	L	A	R	R	Q	A	G	F	E	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	S	E	X	E	E	F	L	Y	S	Q	G	V	T	T	F	L	A	T	T	V	S	T	S	L	E	K	X	K	E	I	L	R	K	A	R	D	Y	I	L	E	N	P	S	T	S	L	L	G	V	H	L	E	G	P	Y	I	S	K	E	K	K	G	A	H	S	E	K	H	I	R	P	P	S	E	R	E	L	S
Template Known Secondary structure												T	T	T										S																				S	T	T		S									S	S	S		S	T	T		T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	F	P	Q	H	G	L	L	L	S	K	S	E	P	L	M	R	E	A	M	Q	A	G	A	H	Y	V	G	G	L	D	P	T	S	V	D	G	A	M	E	K	S	L	D	T	M	F	Q	I	A	L	D	Y	D	K	G	V	D	I	H	L	H	E	T	T	P	A	G	V	A	A	I	N	Y	M	V	E	T
Query Conservation
Alig confidence																																								.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		E	I	D	S	P	A	K	X	L	T	F	A	P	E	I	E	S	S	E	L	L	L	R	L	V	K	R	D	I	V	L	S	A	G	H	S	I	A	.	.	.	.	.	.	T	F	E	E	F	X	K	F	Y	K	E	G	V	K	R	I	T	H	F	P	N	G	L	K	P	L	H	H	R	E	I	G	I	T	G	A
Template Known Secondary structure		T			T	T								T	T	S	T	T	G	G	G	G	G	G	G	G	G	G	T							S	B			.	.	.	.	.	.											T	T					S	S	T	T	T	T	B					S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	E	K	T	P	Q	L	K	G	K	L	T	I	S	H	A	F	A	L	A	T	L	N	E	Q	Q	V	D	E	L	A	N	R	M	V	V	Q	Q	I	S	I	A	S	T	V	P	I	G	T	L	H	M	P	.	L	K	Q	L	H	D	K	G	V	K	V	M	T	G	T	D	S	V	I	D	H	W	S	P	Y	G
Query Conservation																																																							.
Alig confidence									.	.	.	.																																											.
Template Conservation									.	.	.	.
Template Sequence		G	L	L	L	D	D	V	.	.	.	.	K	L	E	L	I	C	D	G	V	H	L	S	R	E	X	V	K	L	V	Y	K	V	K	K	A	N	G	I	V	L	V	T	D	S	I	S	A	A	G	L	K	D	G	T	T	T	L	G	D	L	V	V	K	V	K	D	G	V	P	R	L	E	D	G	T	L	A	G	S
Template Known Secondary structure						T	T		.	.	.	.							S	S	S	S	S													T	G	G	G							B		T	T	T	T	S		S						T	T							T	T					T	T	S		B			B
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	M	L	E	K	A	N	L	Y	A	Q	L	Y	I	R	P	N	E	Q	N	L	S	R	S	L	F	L	A	T	G	D	V	L	P	L	N	E	K	G	E	R	V	W	P	K	A	Q	D	D	A	S	F	V	L	V	D	A	S	C	S	A	E	A	V	A	R	I	S	P	R	T	A	T	F	H	K	G	Q
Query Conservation
Alig confidence																			.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	L	F	F	S	Q	A	V	K	N	F	R	K	F	T	G	C	.	.	.	.	S	I	T	E	L	A	K	V	S	S	Y	N	S	C	V	E	L	G	L	D	D	R	G	R	I	A	E	G	T	R	A	D	L	V	L	L	D	E	D	L	.	.	.	.	.	.	.	.	.	N	V	V	X	T	I	K	E	G	E
Template Known Secondary structure																			.	.	.	.										T								T		T	T	S	S			S	T	T	S	B								T	T		.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																			.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.										.	350	.	.	.	.	.	.	.	.
		453	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	W	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	F	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions