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Job DescriptionP77554
Confidence100.00%DateThu Jan 5 12:30:31 GMT 2012
Rank21Aligned Residues381
% Identity12%Templatec1gkrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:non-atp dependent l-selective hydantoinase; PDBTitle: l-hydantoinase (dihydropyrimidinase) from arthrobacter2 aurescens
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110.........120.........130..
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Query Sequence  HYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGP
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Template Sequence  DVIVKNCRLVSS. . . . . . . . . . DGITEADILVKDGKVAAISADTS. DVEASRTIDAGGKFVMPGVVDEHVHIIDMDLKNR
Template Known Secondary structure  T..........TTTS

T.T


TT




GGGTTT
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   3......10.... .....20.........30....... ..40.........50.........60.........70.
 
   133......140.........150......... 160.........170.........180.........190.........200.........210.
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Query Sequence  WRSLNRPAGTTIQDMIKLEQKMLPELQ. PYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFE
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Template Sequence  YGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGNLPEIRKMHDAGAVGFSMMAA
Template Known Secondary structure  S

T
S
SSS
S
S
SSB



TT
TT

B

BSS
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   212.......220 .........230.........240.........250.........260.........
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Query Sequence  CEIVAFPQH. . . . . . . . . . . . . . . . . . . . . . GLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYD
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Template Conservation                                                                             
    
Template Sequence  SVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAG
Template Known Secondary structure  SBTTTB
B

T
B


TT

SS

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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  KGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQ
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Template Sequence  CRLIVLHVSN. . . . . . . . PDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPP. . . . . VRSAEMNIRLWE
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S........TT


S

GGGGGGG

SS
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   233......240.. .......250.........260.........270.........280....... ..290.........
 
   350.........360........ .370.........380.........390.........400........ .410......
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Query Sequence  LHDKGVKVMTGTDSVIDHW. . . . . . . . . . . . SPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLP. LNEKGERV
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Template Sequence  QLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKG
Template Known Secondary structure  T








GGGTGGGGT
GGGS


B

TTTTGGGTSS
TT
TTTSS
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   300.........310.........320.........330.........340.........350.........360.........370.........
 
   417..420.........430... ......440.........450.......
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Query Sequence  WPKAQDDASFVLVDASC. . . . . . . . . . . . . . . . SAEAVARISPRTATFHKGQLVWGS
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Template Sequence  TLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEK
Template Known Secondary structure  S

TTSB

S




GGG
SSS



TTTT


TTT
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   380.........390.........400.........410.........420.........430......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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