Return to main results Retrieve Phyre Job Id

Job DescriptionP31666
Confidence99.85%DateThu Jan 5 11:48:29 GMT 2012
Rank10Aligned Residues113
% Identity20%Templated2c1ia1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240......... 250.........260.........270.........280.........290.... .....300.........
Predicted Secondary structure 







.
























.






Query SS confidence 

















.












































.














Query Sequence  RAVVITFDDGLKSVSRYA. YPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRD. VFDFQSHTHFLHRVD
Query Conservation 
 








 
    
. 






  

 

 
  
              

  

 

  .   
 


  
    
Alig confidence 

















.






















.............








.










....
Template Conservation 
 
 





        

  
    
 



  
      .............          




 

  
....
Template Sequence  KVVALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGN. . . . . . . . . . . . . EDLVKRIKSEGHVVGNHSWSH. . . .
Template Known Secondary structure 
S


TTTTT



GGGTTT
.............TT


SS
....
Template Predicted Secondary structure 















.............











....
Template SS confidence 















































































   268.270.........280.........290.........300......... 310.........320.........330
 
   310.........320.........330....... ..340.........350.........360.....
Predicted Secondary structure 










.













Query SS confidence 



























.



























Query Sequence  GYRRPILLSRSEHNILFDFARSRRALAQ. FNPHVWYLSYPFGGFNDNAVKAANDAGF
Query Conservation      
 
          

  

  

 .

     





  
       
 


Alig confidence  ....























.



























Template Conservation  ....     

      

      
    
     

 
 
         
     
Template Sequence  . . . . PILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRNSLDLSFI
Template Known Secondary structure  ....

GGGS
S





GGG


TSS
Template Predicted Secondary structure  ....



















Template SS confidence 
























































   331........340.........350.........360.........370.........380...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions