Return to main results Retrieve Phyre Job Id

Job DescriptionP31666
Confidence21.38%DateThu Jan 5 11:48:29 GMT 2012
Rank362Aligned Residues56
% Identity14%Templated1szna2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.54

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240..... ....250...
Predicted Secondary structure 




















..................
Query SS confidence 





















































. . . . . . . . . . . . . . . . . .







Query Sequence  TTTSVRAFNNQMAWLRDRGYATLSMVQLEGYVKNKINLPARAVVITFDDGLKSV. . . . . . . . . . . . . . . . . . SRYAYPVL
Query Conservation    

   
  

  
   

  


 

         

 
 








 
 ..................   
 


Alig confidence 






















.................













..................







Template Conservation    


  
      
   

   .................
     




     
  
       


 

  


 
Template Sequence  CDIDESKFLSAAELIVSSGLLDA. . . . . . . . . . . . . . . . . GYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKV
Template Known Secondary structure  T


TT.................T



SS
B
TT

BTTB

B
TTT
TT
Template Predicted Secondary structure 







.................























Template SS confidence 















































































   24.....30.........40...... ...50.........60.........70.........80......
 
   254.....260....
Predicted Secondary structure 



Query SS confidence 










Query Sequence  KQYGMKATAFI
Query Conservation 



  

 

Alig confidence 










Template Conservation     
 
 


 
Template Sequence  HALGLKLGIYS
Template Known Secondary structure  TT
Template Predicted Secondary structure 




Template SS confidence 










   87..90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions