Job Description P31666 Confidence 99.59% Date Thu Jan 5 11:48:29 GMT 2012 Rank 14 Aligned Residues 125 % Identity 20% Template c3qbuD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of putative peptidoglyacn deactelyase (hp0310) from2 helicobacter pylori Resolution 2.57 Å

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		233	.	.	.	.	.	.		240																								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure									.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	V	I	T	F	D	.	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	S	V	S	R	Y	A	Y	P	V	L	K	Q	Y	G	M	K	A	T	A	F	I	V	T	S	R	I	K	R	H	P	Q	K	W	N	P	K	S	L	Q	F	M	S	V	S	E
Query Conservation									.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	A	Y	G	V	D	I	D	A	V	A	G	W	L	G	S	Y	G	G	E	D	S	P	D	D	I	S	R	G	L	F	A	G	E	V	G	I	P	R	L	L	K	L	F	K	K	Y	H	L	P	A	T	W	F	V	P	G	H	S	I	E	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Q
Template Known Secondary structure																		T	S	S		T	T														T												T	T																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.														70	.	.
		289	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure								.																																												.
Query SS confidence								.																																												.
Query Sequence		L	N	E	I	R	D	.	V	F	D	F	Q	S	H	T	H	F	L	H	R	V	D	G	Y	R	R	P	I	L	L	S	R	S	E	H	N	I	L	F	D	F	A	R	S	R	R	A	L	A	Q	.	F	N	P	H	V	W	Y	L	S	Y	P	F	G	G	F	N	D	N	A	V	K	A	A	N	D	A	G	F	H
Query Conservation								.																																												.
Alig confidence								.												.	.	.	.	.	.	.	.																									.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		M	K	M	I	V	D	A	G	H	E	V	G	A	H	G	Y	S	H	.	.	.	.	.	.	.	.	E	N	P	I	A	M	S	T	K	Q	E	E	D	V	L	L	K	S	V	E	L	I	K	D	L	T	G	K	A	P	T	G	Y	V	A	P	W	W	E	F	S	N	I	T	N	E	L	L	L	K	H	G	F	K
Template Known Secondary structure							T	T	T					B			S	S		.	.	.	.	.	.	.	.			G	G	G	S																					S	S								G	G	G			S	S								T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	T	T	M	K	G	K	V	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	H	S	L	M	H	N	D	F	T	P
Template Known Secondary structure								S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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